Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2536g00019 ATGAACCTCTTCTTTGCTAGCTTCCTCTTCCTCATCCCAATTCTCCTTCTGTTTAGGAGATTATCATCCAAAAGGGTCCCTCCAGGTTCTCTTGGAATACCCTTTATTGGTCAAAGCCTTGCTCTTCTTGGAGCAATGCGAGCCAACACTGCAGAAAAATGGGCTGAAGAAAGAGTGAGAAAGTATGGTCCTGTTTCAAAGCTGAGCCTATTTGGAAAACCAACAGTATTCATCTATGGACAGGCTGCAAATAAGTTAATATTCAGTAACGAAGGTAACACTGTTGCTTTCCATCAACCTCAGTCCATGAAAATGATCTTGGGAACCCGAAACTTGTTTGAACTGAGTGGTCAAGATCACAAGCGGGTCAGAAGTGCACTTGCCAGATTCTTGAAGCCAGAGTCCTTGAAACAATCTGTGGCGAAAATGGATGAAGAAGTTAGGAGGAACATTGAGATGCATTGGCAGGAGAAACAGCAGGTCACGGTGTTGCCCTTGATGAAGACACTCACATTCAACATAATTTGCTCTCTTATGTTTGGGCTTGAGCAAGGAAAACATAGAGATCAATTCCTGGCTTCATTCCAAGCAATGATGGAAGGATTATGGTCAGTTCCTATTAATATTCCCTTCACACGGTATAGCCATAGCCTCAGAGAAAGTGCAAGGATACAAGAGATGTTGAAGGAGGTCGTGCAAAAGAAGAAGATTCAACTTGCGCAAAATGAAGCTTCTCCTCACCAAGACTTAATCACATCCTTGCTTTCCATGGTTGATGAAAATGACCAACAATTGATCACTGAGAGGGAAATCATAGAAAATGCTATGCTTGTCATGGTTGCTGGACATGAAACTTCATCTATTCTCATTACTTTCATTGTCCGACTCTTGGCTATTGATCCTACTGTTTGTGAAGCAGTTCTTCAAGAACAAGAAGAGATAGCAAAAAGCAAGTCCTCAGGAGAGTCTCTGACATGGGAAGACCTTGCCAAGATGAAGTATACATGGAGAGTAGCATTAGAAACTCTTAGGATGATTCCTCCTGCCTATGGTGGCTTCAGAAAATCATTGACAGATATTGAATACGGTGGATACATTATACCCAAAGGGTGGCAAATCTTCTGGGTTACATCAATGACTCACATGGACAATAGCCTATTCCCAGAGCCATCAAAATTTGATCCAAGTAGATTTGAAAACCAGGGATCTATTCCACCCTATTGCTTCATCGCATTTGGTGCAGGAACAAGAATATGTCCAGGATATGAGTTAGCTAGGATTGAAACTCTTGTGGCAATTCATTATCTGGTAACAAGGTTTACTTGGAAGCTAGCTGCTGACGATTTATTCAGAAGGAATCCAACGCCAGAACCCACTCAAGGACTACCTATTCAAATTTGGCCAAGGAAACTTTCTTAG 1419 0.4186 MNLFFASFLFLIPILLLFRRLSSKRVPPGSLGIPFIGQSLALLGAMRANTAEKWAEERVRKYGPVSKLSLFGKPTVFIYGQAANKLIFSNEGNTVAFHQPQSMKMILGTRNLFELSGQDHKRVRSALARFLKPESLKQSVAKMDEEVRRNIEMHWQEKQQVTVLPLMKTLTFNIICSLMFGLEQGKHRDQFLASFQAMMEGLWSVPINIPFTRYSHSLRESARIQEMLKEVVQKKKIQLAQNEASPHQDLITSLLSMVDENDQQLITEREIIENAMLVMVAGHETSSILITFIVRLLAIDPTVCEAVLQEQEEIAKSKSSGESLTWEDLAKMKYTWRVALETLRMIPPAYGGFRKSLTDIEYGGYIIPKGWQIFWVTSMTHMDNSLFPEPSKFDPSRFENQGSIPPYCFIAFGAGTRICPGYELARIETLVAIHYLVTRFTWKLAADDLFRRNPTPEPTQGLPIQIWPRKLS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2536g00019 472 CDD CYP90-like 58 468 - -
Gabi2536g00019 472 Pfam Cytochrome P450 27 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 SUPERFAMILY Cytochrome P450 19 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Gabi2536g00019 472 Gene3D Cytochrome P450 18 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 PANTHER CYTOCHROME P450 26 25 451 - -
Gabi2536g00019 472 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 PRINTS E-class P450 group I signature 170 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 FunFam Taxadiene 5-alpha hydroxylase 18 469 - -
Gabi2536g00019 472 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00019 472 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2536g00019 Gabi-Chr2536 329532 332027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2536g00019 6 440 Cytochrome P450 AT5G45340 32.494 3.57e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2536g00019 - - gmx:100790001 705.286