Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2536g00015 ATGGCTGATTTTGGTCACTATTTTGTGCTACTTCTCATTTGGCTAGTGTCAATCTTCTTATTACGATTGATCTTAACCAAGTCTCGCATTAAATCACGTCTTCCACCAAGTCCTCGTGCTCTTCCGGTCCTCGGCCACCTCTACCTCCTCACCAAGCTCCCTCACCAAGCATTTCACAATATCTCAACACGTTATGGCCCTTTGGTTTATCTCTTGTTTGGTTCCAAACCATGTGTTCTTGTTTCCTCGCCAGAGATAGCAAGACAATGCCTCAAAACCCATGAAACTTGTTTCTTAAACCGACCAAAAAGAACCAACGTAGACTACATCACATATGGTTCTTCAGATTTTGTATTGGCACCCTATGGACCTTATTGGAGGTTCATGAAAAAGCTTTGCATGACTGAACTTCTTGGAGGTCGCATACTTCACCAGCACCTTCCTATTAGGAGTGAAGAAACAAAGCTTTTCTTGAAGAGTATGATGAAAAAAGCTGAATTGAGAGAAGAGGTGAATGTAGGGAAGGAGTTATCAATGCTTGCAAATAACATAATCACAAGGATGGCTTTGAGAAGAAGGTGTTCTGATGTTGAAGGAGAAGGGAACAAGTTGATTGAGTTGGTCAAAGAGATGACTGAACTTGGTGGGAAGTTCAACTTGGGAGATATGTTGTGGTTTGTTAAGAAGTTGGATTTGCAAGGGTTTGGTAAAAGGCTTGAGAGTGTTAGAAGTAGGTATGATGCTATAATGGAGAGGATCATGAAGGAACATGAAGATGCAAAGAGAAAAAAGAAGAAGGAAGAGGAAATTGGTAGTAATGGAGATGAAGCAGTGAGGGATTTACTTGATATTTTACTTGATATCTATTCTGATGAAAATTCTGAGATTAGATTAACAAGAGAAAATATCAAGGCATTCATTATGAACATGTTTGGTGCTGGAACTGAAACATCAGCTTATACAATAGAATGGGCTTTGGCTGAGTTAATAAACCATCCAGAAATGATGGGAAAAGCAAGGCAAGAGATTGATTCAGTAGTTGATAAGAGAAGATTGGTGGAGGAATCAGATATTCCAAACCTTCCCTATGTTCAATCAATAATTAAGGAAACAATGAGGCTTCACCCCACTGGACCCTTAATAGTGAGGCAATCAACTGAAGATTGTAATGTTAATGGGTACTACATTCCAGCAAGGACTACTGTGTTTGTAAATGTTTGGGCTATTGGTAGGGACCCAAACTATTGGAAAAACCCACTTGTGTTCCAACCAGAGAGGTTCATTGATAAAGAGGGGTTGAGCCCTTTGGATCTGAAGGGCCAGAATTTTGAACTTTTGTCATTTGGGGCTGGAAGAAGAAGTTGCCCTGGTGCTTCACTAGCTTTGCAAATTATTCCCACAACTTTGGCTAGTATGATTCAGTGTTTTGAATGGAAGGTTGGTGAAGGGAATGGAATAGTTGACTTGGAGGAGGGACCTGGAATGGCCCTTCCAAGGGCACATCCCCTTCTATGCATCCCTGTGGCTAGGCTCCTTCCTTTTGCATCACTATGA 1554 0.4099 MADFGHYFVLLLIWLVSIFLLRLILTKSRIKSRLPPSPRALPVLGHLYLLTKLPHQAFHNISTRYGPLVYLLFGSKPCVLVSSPEIARQCLKTHETCFLNRPKRTNVDYITYGSSDFVLAPYGPYWRFMKKLCMTELLGGRILHQHLPIRSEETKLFLKSMMKKAELREEVNVGKELSMLANNIITRMALRRRCSDVEGEGNKLIELVKEMTELGGKFNLGDMLWFVKKLDLQGFGKRLESVRSRYDAIMERIMKEHEDAKRKKKKEEEIGSNGDEAVRDLLDILLDIYSDENSEIRLTRENIKAFIMNMFGAGTETSAYTIEWALAELINHPEMMGKARQEIDSVVDKRRLVEESDIPNLPYVQSIIKETMRLHPTGPLIVRQSTEDCNVNGYYIPARTTVFVNVWAIGRDPNYWKNPLVFQPERFIDKEGLSPLDLKGQNFELLSFGAGRRSCPGASLALQIIPTTLASMIQCFEWKVGEGNGIVDLEEGPGMALPRAHPLLCIPVARLLPFASL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2536g00015 517 Coils Coil 250 270 - -
Gabi2536g00015 517 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 CDD CYP93 66 507 - -
Gabi2536g00015 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 504 - -
Gabi2536g00015 517 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 FunFam Cytochrome P450 family protein 26 505 - -
Gabi2536g00015 517 SUPERFAMILY Cytochrome P450 35 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Gabi2536g00015 517 Gene3D Cytochrome P450 25 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2536g00015 517 Pfam Cytochrome P450 35 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2536g00015 Gabi-Chr2536 206634 208755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2536g00015 1 510 Cytochrome P450 AT5G06900 52.539 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2536g00015 K24188 - gmx:100807524 870.152