Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2536g00002 ATGGCGCCTCCTCCTTCTTCTTCTTCTTCTTCTTATGATGCTTCATTTCATCCCAAAAGATATGATGTTTTTATTAGCTTTAGAGGTGAGGACACTCGGAGCAACTTCACGAGTCACCTTCGTCATGCTATGCGTCAAAAGCAGATCCAAGTATACATGGATGACGAAATGAACAAAGGAGATGAGATCTCGCTAGGACTTTTAGAAGCAATTGAAGATTCACACATATCGGTCATAGTTTTCTCAGAAGACTATGCTTCCTCAAAGTGGTGCTTGGATGAACTACTTAAAATACTCGAATGCAGGGAAGAGGGACAGGATGTGATACCTGTCTTCTATCAAATTGACCCATCAAACGTGCGGAAGCAGAAAGGGAGTTACGAGGAAGCCTTCCAAAAACACGAGCGAGATTTCAGCAACAACCAAGACAAGTTGAGCAAGTGGAAACAAGCTCTGTTTGAAGCAGCCAATCTAGCTGGGTGGGACTCTCGGATACACCGGGACGAATCGACACTAATTCAAAAGATTGTCGAAGATGTTTTGAAAAAATTGGAATACAAGTACCCACCAAGGAAATCAAAATGCCCTTTTGGGACCGATGAAAACCTTGCACCTATTGAATCATTATTAACAGAATTTCAAACCGTTGGAATTTGGGGCATGGGTGGCATAGGTAAAACCACCATAGCTAAATGGTTATTTGGTAAATACTCTTCTCAATATGAAGGATCATGTTTTATGGAAAATATAAGGGAAAATTTTGAAAAAGATAAACAGGCACTACGCAATGATCTCGTTTCCGAGCTTCTGGGGGAATATGAGAGAAAAATCAATGTGGAATCCGTTGTTGTTAAGAGAAGGCTTTCTTTTAAAAGAGTTTTTGTTGTGCTTGATGATGTGAGTACTTCAAAGCAATTAGAATATCTAGATGGAGTGCTTCAATACTTTGGATCAGGTAGTAGAATCATCATTACATCCAGAAACAGGCATGTCCTCCTATGGAAAGGAGTTGATGAAATAAAAATACATCATGTTAAGGAATTGAACCCCAAGAATTCCCTTCAGCTTTTCAGCTTGAATGCCTTCAAACATAACCATCCTTTAATGGGATACGAAGTGTTATCAAATAAAGCAGTTGCTTATGCCAAAGGCTTGCCATTAGTCTTAAAGGTTGTAGGTTCTTTTCTTTATTCAAAAACTAAAATTGAGTGGGAAAGTGAACTGGAAAAATTACAAAAGATTCCCGATGATGAAATTCAAAGTGTGTTACAATTGAGCTATGATGGATTACGTGATCAAGAGAAGGACATATTTCTAGACATTGCATGCTTTTTGAAGGGAGAGCGTGAAGAGCATGTCGTGAGCTTGTTAAAGGACTTCAATCCATGTATTGGCTTAAGAAACCTTCAAGATAAGGCTCTTATAACTATAGAGCATGATGTCGTACAGATGCATGACTTGATACAAGAAATGGGTTTGGAGATTGTTCGTCAAGAATCTATCAAAGATCCTGGAAAACGCAGCCGATTGTGGGTTGCAGAGGACATCTATAAAGTACTGAAATATAATAGGGGGACTGATAAAGTTGAAGGCATAAATTTAGATATGTCCCAAATTAGAGATCTACATTTCAGTGTTGACACATTCAGAAACATGACTAATCTAAGATTTCTGAAATTATATTTGCCGTCTGGTGTCAAAGATTATAGTTTGTTGTCCCTTCCTACATGTGTCCAATTGTTTTCTATTAAATTAAGGTACCTTGAGTGGGATAGATACCTTTCAAAGTCACTTCCATTAATGTTTTGTACGGAGAAGCTTGTTGAGCTTTCAATGCCAGACAGCCACCTTGAAAAACTTTGGGATGGGGTGCAGGATTTGGGGAATCTAAAGAGAATAAACCTTGGTGGATCCACAAGGTTGATGGAACTCCCGGATTTCTCTATGTTGACAAATCTTGAAGAAGTAGATCTCTCCTATTGTGAAAGTTTGTATCATATTCATCCATCTCTTTTATCTCTCCACTCGCTTGTTACTTTGGATCTATATGGGTGTAAAAGTTTGATCAGTCTTGAAAGTGAGATTCACTTAAAATCTCTTGAATTTCTTTGCTTTGATAACTGCTTAAGCCTCAAGAAATTTTCGGTGTCGTCAGAGGAAATCAGAGAATTGAATTTCGTGGGCACAAGCATTGAAATATTGTCTTCAGCTATTAAGCAACTTACAAAGTTGAGACATCTTGAATTAAGTAATTGCAAGAGGCTAGAGTCTCTGCCAGAGCTTCCACAATTCATAACACATTTGTATCTAAGTGGAAGCAATATCAAGTGTTTGCCTGGAAACTTAAAGCAACTTACAGAGCTACGCAGTCTTTACTTAATTGATTGCAAGAGGCTTGAGTCTCTCCCAGAGCTTCCACAATTCATTACACATTTGAATTTAAGTGGAAGCAATATCAAGTGTTTGCCTGGAAACATAAAGCAACTTACAGAGCTGCGCAGTCTTCACTTATGTGATTGTGAGAGGCTTGAGTCTCTGCCAGAGCTTCCACAATTCATTACACATTTGTATCTAAGTGGAAGCAATATCAAGTGTTTGCCTGGAAACATAAAGCAACTTACAGAGCTGCACAATCTTCACTTAAGTGATTGCGAGAGGCTTGAGTCTCTCCCAGAGTTTCCACAATTCATTAGAATTTTGGATCTAAGTAGAAGCAATATCAAGTGTTTGCCTGGAAACATAAAGCAACTTACAGAGCTGCACAATCTTCACTTAAGTCATTGCAAGAACCTTGAGTCTCTGCCAGAGCTTCCACAATTCATTACACATTTGTATCTAAGTGGAAGCAATATCAAGTGGTTGCCTGGAAACATAAGGCAACTTACAAAGTTGCGCTGTCTTTATTTAAGTGATTGCAAGAGGCTTGAGTCTCTCCCAAAGCTTCCACAATTCATTACACATTTGAATGTAAGTGGAAGCAATATCAAGTGTTTGCCTGGAAACATAAAGCAACTTACAGAGCTGAGCAATCTTCACTTAAGTCATTGCAAAAGGCTTGAGTCTCTGCCAGAGCTTCCACAATTCATCACACATTTGTATCTAAGTGGAAGCAATATCAAGTGTTTGCCTGGAAACATAAAGCAACTTACAGAGCTGAGCAGTCTTAACTTAAGTGATTGCAAGAGGCTTGAGTCTCTTCCAGAGCTTCCACAATTCATTACACATTTGTATCTAAGTGGAAGCAATATCAAGTGTTTGCCTGGAAACATAAAGCAACTTACAGAGCTGAGCAATCTTAACTTAAGTGATTGCAAGAGGCTTGAGTCTCTCCCAGAGCTTCCACAATTCATTACACATTTGTATCTAAGTGGAAGCAATATCAAGTGTTTGCCTGGAAACATAAAGCAACTTACAGAGCTGAGCAATCTTAACTTAAGTGATTGCAAGAGGCTTGAGTCTCTCCCAGAGCTTCCACAATTCATTACACATTTGTATCTAAGTGGAAGCAATATCAAGTGTTTGCCTGGAAACATAAAGCAACTTACAGAGCTGAGCAGTCTTTACTTAAGTGATTGA 3576 0.387 MAPPPSSSSSSYDASFHPKRYDVFISFRGEDTRSNFTSHLRHAMRQKQIQVYMDDEMNKGDEISLGLLEAIEDSHISVIVFSEDYASSKWCLDELLKILECREEGQDVIPVFYQIDPSNVRKQKGSYEEAFQKHERDFSNNQDKLSKWKQALFEAANLAGWDSRIHRDESTLIQKIVEDVLKKLEYKYPPRKSKCPFGTDENLAPIESLLTEFQTVGIWGMGGIGKTTIAKWLFGKYSSQYEGSCFMENIRENFEKDKQALRNDLVSELLGEYERKINVESVVVKRRLSFKRVFVVLDDVSTSKQLEYLDGVLQYFGSGSRIIITSRNRHVLLWKGVDEIKIHHVKELNPKNSLQLFSLNAFKHNHPLMGYEVLSNKAVAYAKGLPLVLKVVGSFLYSKTKIEWESELEKLQKIPDDEIQSVLQLSYDGLRDQEKDIFLDIACFLKGEREEHVVSLLKDFNPCIGLRNLQDKALITIEHDVVQMHDLIQEMGLEIVRQESIKDPGKRSRLWVAEDIYKVLKYNRGTDKVEGINLDMSQIRDLHFSVDTFRNMTNLRFLKLYLPSGVKDYSLLSLPTCVQLFSIKLRYLEWDRYLSKSLPLMFCTEKLVELSMPDSHLEKLWDGVQDLGNLKRINLGGSTRLMELPDFSMLTNLEEVDLSYCESLYHIHPSLLSLHSLVTLDLYGCKSLISLESEIHLKSLEFLCFDNCLSLKKFSVSSEEIRELNFVGTSIEILSSAIKQLTKLRHLELSNCKRLESLPELPQFITHLYLSGSNIKCLPGNLKQLTELRSLYLIDCKRLESLPELPQFITHLNLSGSNIKCLPGNIKQLTELRSLHLCDCERLESLPELPQFITHLYLSGSNIKCLPGNIKQLTELHNLHLSDCERLESLPEFPQFIRILDLSRSNIKCLPGNIKQLTELHNLHLSHCKNLESLPELPQFITHLYLSGSNIKWLPGNIRQLTKLRCLYLSDCKRLESLPKLPQFITHLNVSGSNIKCLPGNIKQLTELSNLHLSHCKRLESLPELPQFITHLYLSGSNIKCLPGNIKQLTELSSLNLSDCKRLESLPELPQFITHLYLSGSNIKCLPGNIKQLTELSNLNLSDCKRLESLPELPQFITHLYLSGSNIKCLPGNIKQLTELSNLNLSDCKRLESLPELPQFITHLYLSGSNIKCLPGNIKQLTELSSLYLSD 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2536g00002 1191 Gene3D Ribonuclease Inhibitor 721 896 IPR032675 -
Gabi2536g00002 1191 Gene3D Ribonuclease Inhibitor 1117 1191 IPR032675 -
Gabi2536g00002 1191 Gene3D Ribonuclease Inhibitor 986 1116 IPR032675 -
Gabi2536g00002 1191 Gene3D Ribonuclease Inhibitor 525 720 IPR032675 -
Gabi2536g00002 1191 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 770 IPR044974 GO:0006952
Gabi2536g00002 1191 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 161 IPR035897 -
Gabi2536g00002 1191 Gene3D - 347 431 IPR042197 -
Gabi2536g00002 1191 SUPERFAMILY L domain-like 483 848 - -
Gabi2536g00002 1191 SUPERFAMILY L domain-like 755 1071 - -
Gabi2536g00002 1191 Pfam TIR domain 21 192 IPR000157 GO:0007165
Gabi2536g00002 1191 Pfam NB-ARC domain 211 427 IPR002182 GO:0043531
Gabi2536g00002 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 441 IPR027417 -
Gabi2536g00002 1191 Gene3D - 16 184 IPR035897 -
Gabi2536g00002 1191 Gene3D Ribonuclease Inhibitor 897 985 IPR032675 -
Gabi2536g00002 1191 SMART LRR_bac_2 806 825 - -
Gabi2536g00002 1191 SMART LRR_bac_2 1026 1045 - -
Gabi2536g00002 1191 SMART LRR_bac_2 1137 1157 - -
Gabi2536g00002 1191 SMART LRR_bac_2 850 869 - -
Gabi2536g00002 1191 SMART LRR_bac_2 1093 1113 - -
Gabi2536g00002 1191 SMART LRR_bac_2 1158 1177 - -
Gabi2536g00002 1191 SMART LRR_bac_2 741 761 - -
Gabi2536g00002 1191 SMART LRR_bac_2 1114 1133 - -
Gabi2536g00002 1191 SMART LRR_bac_2 1070 1089 - -
Gabi2536g00002 1191 SMART LRR_bac_2 1049 1069 - -
Gabi2536g00002 1191 SMART LRR_bac_2 1005 1025 - -
Gabi2536g00002 1191 SMART LRR_bac_2 894 913 - -
Gabi2536g00002 1191 SMART LRR_bac_2 762 781 - -
Gabi2536g00002 1191 SMART LRR_bac_2 982 1001 - -
Gabi2536g00002 1191 ProSiteProfiles TIR domain profile. 19 184 IPR000157 GO:0007165
Gabi2536g00002 1191 SMART till_3 20 158 IPR000157 GO:0007165
Gabi2536g00002 1191 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 186 - -
Gabi2536g00002 1191 Gene3D - 185 337 IPR027417 -
Gabi2536g00002 1191 Pfam Leucine Rich Repeat 606 625 IPR011713 -
Gabi2536g00002 1191 SUPERFAMILY L domain-like 1023 1190 - -
Gabi2536g00002 1191 PRINTS Disease resistance protein signature 382 396 - -
Gabi2536g00002 1191 PRINTS Disease resistance protein signature 215 230 - -
Gabi2536g00002 1191 PRINTS Disease resistance protein signature 287 301 - -
Gabi2536g00002 1191 PRINTS Disease resistance protein signature 739 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2536g00002 Gabi-Chr2536 20147 26687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2536g00002 3 842 WRKY Transcription Factor Family AT4G12020 34.798 7.30e-106 366