Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2535g00031 ATGGTTGCTCTCTTCAAAACATCATACCCACTTTTCCTTTGCTTCATTCTTTTCTATTTATCCCATGTATTGCTTGTAAATTGCACTGAGTTTGAAGTTGGTGATCTAGATGGTTGGGTTGTCCCCAAGTCAAAGGACAATGATGAAATGTACAATCAGTGGGCATCCCAAAACAGATTCAAAGTTAATGATACTGTTCGTTTCATGTTCAACAAAGACTCGGTTATGGTGGTGACTGAAGAAGAGTATGGAAAATGTAGATCCTCTCGTCCAGTCTTTTTCTCTAACAACGGTGACACTGTCTTCAAGTTTGACAGACCCGGCTTGTTCTACTTCATTAGTGGGGTTAGTGGTCACTGTGACAGAGGACAGAAGATGATAATTAAGGTTTTGGATGTAGTGCCAGCAACCCCACCCCAATTAGCAAATGAGAGTGCTAAAAAATCACATTCTACAAGTGAAGTTGCTGAAATAATAACTCCAATGAGTATAACAACATCGACCCTTTTTGTTCTGTTATTCTTAGGCCTGCTTCATGCTTGA 543 0.3978 MVALFKTSYPLFLCFILFYLSHVLLVNCTEFEVGDLDGWVVPKSKDNDEMYNQWASQNRFKVNDTVRFMFNKDSVMVVTEEEYGKCRSSRPVFFSNNGDTVFKFDRPGLFYFISGVSGHCDRGQKMIIKVLDVVPATPPQLANESAKKSHSTSEVAEIITPMSITTSTLFVLLFLGLLHA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2535g00031 180 PANTHER BLUE COPPER PROTEIN 29 146 IPR039391 GO:0009055
Gabi2535g00031 180 ProSiteProfiles Phytocyanin domain profile. 29 132 IPR003245 GO:0009055
Gabi2535g00031 180 CDD OsENODL1_like 29 131 IPR041846 -
Gabi2535g00031 180 Gene3D - 28 134 IPR008972 -
Gabi2535g00031 180 SUPERFAMILY Cupredoxins 28 131 IPR008972 -
Gabi2535g00031 180 Pfam Plastocyanin-like domain 47 124 IPR003245 GO:0009055
Gabi2535g00031 180 FunFam Early nodulin-like protein 1 28 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2535g00031 Gabi-Chr2535 261572 262237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2535g00031 11 174 Phytocyanin Superfamily AT1G48940 49.704 1.57e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2535g00031 - - gmx:102667643 237.654