Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2535g00024 ATGGCTGGGGGAAGAAGGAGGAAGCACCACTTTGGCAGAATCCATGCATTCTCGTGTGGGAAAGCTTCCATGAAAGATGAACATTCACTTATAGGAGGCCCTGGATTCTCAAGGAAAGTCTATTGCAATGACCCAGAACGTGCTATGACGAGTCTTCTGAATTATGGTGACAATTATGTCAGAACTACTAAGTATACATGGGCCACGTTCCTCCCCAAGTCCTTGTTTGAGCAATTCAGGAGGGTTGCCAATTTTTACTTCCTAGTGGTTGGAGTTTTGTCTTTCCTTCCGGTCTCTCCTTACTCAGCTGTCAGCAATGTTTTTCCTCTAGTGGTTGTTATTGCTGCTACTATGGCCAAAGAGTTCATTGAGGATTTTAGGCGCAAAAAACAGGATATAGAGATGAATAACAGAAAAGTTAAAGTACATCGTGGAGGTGGTGTTTTTGACAATTCTAAATGGAGGGATTTGAAAGTTGGAGACATAGTGAAGGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTTCATCAAACTATGACGATGCTATTTGCTATGTTGAGACCATGAACCTTGATGGAGAAACAAATCTTAAACTAAAACAAGCGCTGGAAGGAACTTCAAAGTTGCAAGAAGACTCAAGCTTTCAAAATTTCAAGGCTGTTATTATATGTGAAGATCCAAATGCAAATTTGTACACCTTTAAAGGAAGTCTTGAGCTTGAGGATCAACAGTATCCTCTTGCACCTCAGCAGCTACTGCTTAGGGACTCTAAGCTGAGGAACACAGATTTTATCTATGGTGTGGTAATCTTTACTGGTCATGATACAAAGGTTATGCAGAATTCAACAGATCCTCCATCCAAGAGAAGCAAAATTGAGAAACGAATGGATAAGATTATCTACTGTCTGTTCTTTGTCCTTATTTTGATTTCTTTCATTGGGTCCATATTATTTGGAATTTCAACAAAGAAGGACATTAAAAATGGAAGAATGAAGAGATGGTACCTTAGACCTGATGATACCACAATTTACTATGACCCAAATAAAGCAGCAGTTGCAGCAATCCTGCATTTCTTGACGGCACTTATGTTGTATGGTTACTTGATTCCAATTTCCTTGTATGTCTCCATTGAAATTGTGAAAGTTCTTCAAAGCATTTTCATCAACCAGGATGTGCAAATGTATTATGAGGAAACTGACAAGCCAGCACGTGCTCGTACATCAAATTTGAATGAAGAACTTGGCCAAGTTGATACCATACTTTCAGATAAAACAGGAACTTTGACTTGCAATTCTATGGAATTTATCAAATGTTCTATTGCTGGGACTGCTTATGGACGAGGAGTTACAGAAGTTGAGAGAGCTCTATCTGGGAGAAAAGTTGAATTCAACAAAGCAAAGTTTGTTCAACCAAAGTCATCCATTAAAGGGTTTAACTTTATGGACGAAAGGATCATGAACGGAAATTGGGTCAGACAACCCAATGCCAATGTAATCCAAAACTCCCTAAGGTTGCTGGCTGTATGCCATACTGCAGTGCCTGAAGTTGATGAGGAAACTGGTAAGGTTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAACTTGGGTTTGAATTTTATGAACGGACACATACAACTATTTCACTGCATGAATTAGACCCCAGAACAGGCAACAAAACCAAAAGGTCCTACAAACTTTTAAATATATTAGAGTTTAGTAGTGCAAGAAAGAGGATGTCTGTAATTGTAAGAGATGAGGAGGGGAAACTACTACTACTAAGCAAAGGCGCTGACAGTGTCATGTTTGAACGAGTTGCAAAGAATGGAAGGGAGTTTGAAGAGAAGACTAAGCAGCACATTAGTGAATATGCTGATTCTGGTCTGAGGACCTTGATACTTGCATATCGTGAACTTCAGGAGGAAGAGTACAATAAATTTAATAAAGAGTTAACAGAGGCCAAGAACTTAGTGAGTGCAGACCAGGAGCAGATTGTAGAGGAAATACTAGAAAATATTGAGAAGGATTTAATTCTTCTAGGTGCTACTGCCGTTGAAGACAAACTACAAGATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCTGGGATCAAGCTATGGGTTTTGACTGGGGATAAAATGGAGACAGCAATTAATATTGGATTTGCTTGTAGTTTACTCAGACAGGGAATGAAACAAATTATAATTAACTCGGATACTCCAGAAAATAAATCACTAGAGAAAATGGAGGACAAGTCTGCTGCGGAAGCGGCAATTAAGGCTAGTGTTCTTCGTCAAATAAGGGAGGCAAAGGCTTTACTTTCTACATCAGATGAAAACTTTGAGGCGTTAGCTCTGATCATTGATGGGAAGTCTCTTACTTATGCACTAGAAGATGATGTAAAGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATATGCTGTCGTTCATCTCCCAAGCAGAAGGCACTTGTTACAAGACTGGTTAAGTCAAGAACTGGTAGTACAACTCTAGCTATTGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGGATTGGTATCAGTGGTGTCGAAGGAATGCAGGCAGTTATGTCGAGTGATATCGCAATTGCCCAATTTCGGTTTCTAGAGCGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCTCTTCAATGATCTGCTACTTCTTTTACAAGAATATTGCCTTCGGCTTCACTCTATTCTTCTTTGAGATGTATGCCTCATTCTCAGGGCAACCTGCATACAATGATTGGTTCATGTCTTTATATAATGTATTCTTCACTTCGCTTCCTGTAATTGCTTTGGGAGTGTTTGACCAGGATGTCTCTTCTAAATTATGTCTCAAGTTTCCATTATTATATCAAGAAGGTGTGCAAAATATCCTATTTAGCTGGAAAAGAATCCTTGGTTGGGCGTTCAATGGGGTTTTGACTTCTGCCATTATATTCTTCTTTTGCATTCGTGCTATGGAGCATCAAGCATTTCGTGAAGGTGGGCAAGCTGTTGAGTTGGAAGTTTTTGGTGCTACCATGTACACTTGTGTTGTGTGGGTGGTGAATTGTCAAATGGCATTATCTATAAGTTACTTCACTTATATACAACATATATTCATATGGGGAAGCATTCTATTCTGGTATATATTCCTCCTAGCATATGGAGCCATGAGCTCCAGCTTCTCAACAACTGCATATAAGGTCTTCATTGAAGCTTGTGCACCAGCCCCATCTTACTGGTTCATCACTTTGCTTGTTCTTATTGCTTCCCTCCTTCCATATTTCACCTATGCTTCCATCCAAATGCGTTTCTTCCCTATGTATCATCAGATGATACAGTGGATAAGAAACGAGGGGAGCACAAGTGATCCAGAATACTGCAATGTGGTAAGGCAAAGATCAATAAGACACACAACAGTTGGATTCACAGCTCGTTTGGAAGCATCCAAACGTTTCGAGGCATCCAAAAGATTTGAAGCATCCAAACGTTCTGAAGCATCCGTAGCTTTTGATGGGATATCTAGGAACCGATAA 3609 0.4004 MAGGRRRKHHFGRIHAFSCGKASMKDEHSLIGGPGFSRKVYCNDPERAMTSLLNYGDNYVRTTKYTWATFLPKSLFEQFRRVANFYFLVVGVLSFLPVSPYSAVSNVFPLVVVIAATMAKEFIEDFRRKKQDIEMNNRKVKVHRGGGVFDNSKWRDLKVGDIVKVEKDEFFPADLILLSSNYDDAICYVETMNLDGETNLKLKQALEGTSKLQEDSSFQNFKAVIICEDPNANLYTFKGSLELEDQQYPLAPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIEKRMDKIIYCLFFVLILISFIGSILFGISTKKDIKNGRMKRWYLRPDDTTIYYDPNKAAVAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDVQMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGVTEVERALSGRKVEFNKAKFVQPKSSIKGFNFMDERIMNGNWVRQPNANVIQNSLRLLAVCHTAVPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTHTTISLHELDPRTGNKTKRSYKLLNILEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERVAKNGREFEEKTKQHISEYADSGLRTLILAYRELQEEEYNKFNKELTEAKNLVSADQEQIVEEILENIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSDTPENKSLEKMEDKSAAEAAIKASVLRQIREAKALLSTSDENFEALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKSRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEMYASFSGQPAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNILFSWKRILGWAFNGVLTSAIIFFFCIRAMEHQAFREGGQAVELEVFGATMYTCVVWVVNCQMALSISYFTYIQHIFIWGSILFWYIFLLAYGAMSSSFSTTAYKVFIEACAPAPSYWFITLLVLIASLLPYFTYASIQMRFFPMYHQMIQWIRNEGSTSDPEYCNVVRQRSIRHTTVGFTARLEASKRFEASKRFEASKRSEASVAFDGISRNR 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2535g00024 1202 PRINTS P-type cation-transporting ATPase superfamily signature 739 749 - -
Gabi2535g00024 1202 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Gabi2535g00024 1202 PRINTS P-type cation-transporting ATPase superfamily signature 853 872 - -
Gabi2535g00024 1202 CDD P-type_ATPase_APLT_Dnf-like 57 1013 - -
Gabi2535g00024 1202 Gene3D - 116 286 - -
Gabi2535g00024 1202 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 1131 IPR023298 -
Gabi2535g00024 1202 Gene3D - 685 893 IPR023214 -
Gabi2535g00024 1202 NCBIfam HAD-IC family P-type ATPase 107 207 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2535g00024 1202 NCBIfam HAD-IC family P-type ATPase 819 935 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2535g00024 1202 Gene3D - 529 667 IPR023299 GO:0000166
Gabi2535g00024 1202 Pfam Phospholipid-translocating P-type ATPase C-terminal 881 1131 IPR032630 -
Gabi2535g00024 1202 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Gabi2535g00024 1202 Pfam E1-E2 ATPase 135 336 - -
Gabi2535g00024 1202 Pfam Cation transport ATPase (P-type) 511 615 - -
Gabi2535g00024 1202 SFLD Haloacid Dehalogenase 408 904 - -
Gabi2535g00024 1202 SUPERFAMILY HAD-like 419 908 IPR036412 -
Gabi2535g00024 1202 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Gabi2535g00024 1202 SFLD p-type atpase 408 904 IPR044492 -
Gabi2535g00024 1202 FunFam Phospholipid-transporting ATPase 116 286 - -
Gabi2535g00024 1202 FunFam Phospholipid-transporting ATPase 689 893 - -
Gabi2535g00024 1202 NCBIfam phospholipid-translocating P-type ATPase 55 1138 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Gabi2535g00024 1202 FunFam Phospholipid-transporting ATPase 531 689 - -
Gabi2535g00024 1202 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1144 - -
Gabi2535g00024 1202 Coils Coil 646 673 - -
Gabi2535g00024 1202 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Gabi2535g00024 1202 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 488 691 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2535g00024 Gabi-Chr2535 186604 193312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2535g00024 1 1176 Primary Pumps ATPases AT1G68710 69.180 0.0 1781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2535g00024 K01530 - gmx:100796405 2123.21