Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2535g00021 ATGGAGATTACTGCCATGGCTTCAGCAACTCCAAGACCTTCTCTTCCAACTCCTTCTACTTCTCCTTCTCACACAGTCACCACCTTCTGCAAGCCTCAACTGAGACGCCCCCATATATCACTACCAACCTCAACCACCATTTCTCTACTCGCTCTCTTCACACCTCCCAACGAAGCCAAAGCCGCTCTCAGCATCTCCAAGGACCAGATTGTCTCTTCTCTCACCCAAGTGGAGAAAACCATCGATCAAGTTCAGGAGGTGGGTTCGAGTTTCCTGGACACGGCACAGCGTGTTGCTGAAGTTGTAGGGAATGCTTTGAAGCCTGGCATCGAAACGGCGTTGCCAATTGTGCAGCAAGCTGGGGAAGAGGCCTTGAAAATTGCTTCCCCAGCATTCTCTGAGGCTTCCAAGAAGGCCCAAGAAGCACTACAAAGCTCCGGTGTTGATACCGAACCTGTTCTCTCTGTTGCTAAGACAGTGGCAGATGCTGCACAGCAAACGACCAAGGTGATTGAAGGTGCCAAGCCAATAGCCTCGTCAACAGTTGAAACCATATCTTCTTCAGATCCTACTGTGATTGCTGGAACAGCTGGAGCACTATTTATTGCATACCTCCTGTTTCCTCCTCTCTGGTCTGCCATCTCCTTTAATCTTCGTGGTTACAAAGGAGAGCTAACTCCTGCTCAAACCCTTGATCTGATATGTACACAAAACCACATTTTGATTGATATTAGGTCAGAGAAGGATAAGGACAAAGCTGGTATCCCTCGCCTTCCCTCTAGTGCTAAAAACAGGATGGTTGCCATTCCTTTGGAAGAACTGCCAAGCAAACTCAGAGGTCTAGTCAGGAATGTGAAGAAAGTGGAAGCTGAAATAGCAGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCACTAATGTTGTGATCTTGGATTCGTACTCGGACTCGGCAAAAATAGTTGCAAGAACACTAACTAGCCTTGGTTTTAAGAACACCAGCATTGTTGCTGATGGATTTTCTGGAAACAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCTTATAAGTTTTCGTTTGCAGAGGTGCTGTCACCATCCAGAGTCATCCCTGCAGCTGTCAGAGGTTTTGGTACATCTAGCCAATCTAGCCCGAAACTTCTTCCTGGGGCTGATTGA 1182 0.467 MEITAMASATPRPSLPTPSTSPSHTVTTFCKPQLRRPHISLPTSTTISLLALFTPPNEAKAALSISKDQIVSSLTQVEKTIDQVQEVGSSFLDTAQRVAEVVGNALKPGIETALPIVQQAGEEALKIASPAFSEASKKAQEALQSSGVDTEPVLSVAKTVADAAQQTTKVIEGAKPIASSTVETISSSDPTVIAGTAGALFIAYLLFPPLWSAISFNLRGYKGELTPAQTLDLICTQNHILIDIRSEKDKDKAGIPRLPSSAKNRMVAIPLEELPSKLRGLVRNVKKVEAEIAALKISYLKKINKGTNVVILDSYSDSAKIVARTLTSLGFKNTSIVADGFSGNKGWLQSRLGTDSYKFSFAEVLSPSRVIPAAVRGFGTSSQSSPKLLPGAD 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2535g00021 393 Coils Coil 278 298 - -
Gabi2535g00021 393 ProSiteProfiles Rhodanese domain profile. 235 356 IPR001763 -
Gabi2535g00021 393 Pfam Rhodanese-like domain 233 343 IPR001763 -
Gabi2535g00021 393 Gene3D - 223 361 IPR036873 -
Gabi2535g00021 393 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 41 356 IPR044690 GO:0009704|GO:0071277|GO:0090333
Gabi2535g00021 393 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 201 343 IPR036873 -
Gabi2535g00021 393 MobiDBLite consensus disorder prediction 1 25 - -
Gabi2535g00021 393 CDD RHOD 229 343 - -
Gabi2535g00021 393 SMART rhod_4 225 353 IPR001763 -
Gabi2535g00021 393 MobiDBLite consensus disorder prediction 10 25 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2535g00021 5 314 Sulfurtransferasese or Rhodanese AT5G23060 69.775 2.07e-155 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2535g00021 - - gmx:100813363 627.861