Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2531g00034 ATGTCTAGCAAAGCTGGTCAGGTCATCAAGTGCAAAGCTGCGGTGGCGTGGGAAGCATGCAAGCCACTAGTGATTGAAGAAATAGAGGTAGCTCCACCACGGGCTGGTGAAGTTCGTTTGAAGATCCTCTACACCTCTCTTTGTCGTTCTGATATTAACTACTGGGACTGCGAGGGCCATACTTCGTTTTTTCCCCGTATACTTGGTCACGAAGCTGCAGGGATTGTGGAGAGCATAGGGGAGGGTGTGACTCATCTCAAACCAGGAGATCATGCACTCCCTGTATTCACTGGAGAGTGTGGGGAATGCCGACATTGTAAGTCTGGAGAGAGCAACATGTGTGAACTGCTAAGGGTCGACATTGATAGGGGTGTTATGCTCAATGATGATGGTAAGACAAGATTCTCCAAAAATGGACAGCCCATATACCACTTTGGGGGAACCTCTACATTTAGTGAATACACAGTTGTCCATGCTAAATGTGTTGCAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTATTCTCAGTTGCGGATTCTGCACAGGATTTGGTGCTACTGTAAACGTGGCAAAACCGAAGCCTGGTTCTTCTGTAGCTATATTTGGATTGGGAGCTGTTGGCCTTGCCGCTGCTGAAGGGGCAAGGCTTTCTGGTGCTTCGAGAATCATTGGGGTTGATGTAATTTCCAGCCGATTTGAACAAGCCAAAAACTTTGGAGTCACTGACTTTGTGAACCCAAAAGATCATGACAAACCTGTACAACAGGTAATTGTTGAAATGACTAAGGGAGGAGTTGATCGTGCACTTGAATGCACCGGAAACATCGAAGCCTCGATCGCAGCATTTGAATGCGTTCATGATGGTTGGGGTGTAGCTGTACTTGTTGGTCTGCCAAAAGATGATGCTGTTTTTAAAACTCACCCTATCAATTTCTTGTTTGAGAGAACCATTAAGGGTACCTTCTTTGGAAACTACAAACCGCTCACTGATCTTCCATCTGTTGTAGAGAAGTACATGAACAAGGAGCTAGAACTGGAGAAATTCATCACTCACTCAGTCCCATTTTCGGAGATTAACAAATCATTTGAATACATGCTAAAAGGGGAGTCAATCAGGTGCATCATTCGCATGGAATAA 1143 0.4532 MSSKAGQVIKCKAAVAWEACKPLVIEEIEVAPPRAGEVRLKILYTSLCRSDINYWDCEGHTSFFPRILGHEAAGIVESIGEGVTHLKPGDHALPVFTGECGECRHCKSGESNMCELLRVDIDRGVMLNDDGKTRFSKNGQPIYHFGGTSTFSEYTVVHAKCVAKINPAAPLDKVCILSCGFCTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARLSGASRIIGVDVISSRFEQAKNFGVTDFVNPKDHDKPVQQVIVEMTKGGVDRALECTGNIEASIAAFECVHDGWGVAVLVGLPKDDAVFKTHPINFLFERTIKGTFFGNYKPLTDLPSVVEKYMNKELELEKFITHSVPFSEINKSFEYMLKGESIRCIIRME 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2531g00034 380 CDD alcohol_DH_plants 9 378 - -
Gabi2531g00034 380 Pfam Alcohol dehydrogenase GroES-like domain 36 164 IPR013154 -
Gabi2531g00034 380 Gene3D - 184 322 - -
Gabi2531g00034 380 Gene3D - 21 371 - -
Gabi2531g00034 380 SUPERFAMILY GroES-like 5 187 IPR011032 -
Gabi2531g00034 380 FunFam alcohol dehydrogenase 1-like isoform X1 19 183 - -
Gabi2531g00034 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Gabi2531g00034 380 PANTHER ALCOHOL DEHYDROGENASE 6 377 - -
Gabi2531g00034 380 Pfam Zinc-binding dehydrogenase 207 327 IPR013149 -
Gabi2531g00034 380 FunFam Alcohol dehydrogenase class-P 184 322 - -
Gabi2531g00034 380 SUPERFAMILY GroES-like 330 378 IPR011032 -
Gabi2531g00034 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 343 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2531g00034 Gabi-Chr2531 270256 274559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2531g00034 37 371 Monolignol Biosynthesis Gene Families AT1G72680 26.074 1.36e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2531g00034 K18857 - gmx:100783858 643.269