Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2531g00033 ATGTCTAGCAAAGCTGGTCAGGTCATCAAGTGCAAAGCTGCGGTGGCGTGGGAAGCATGCAAGCCACTAGTGATTGAAGAAATAGAGGTAGCTCCACCACAGGCTGGTGAAGTTCGTTTGAAGATCCTCTACACCTCCCTTTGTCGTTCTGATGTTAACTACTGGGACTGCAAGGGCCATACTTCGATTTTTCCCCGTATACTTGGTCACGAAGCTGCAGGGATTGTGGAGAGCATAGGAGAGGGTGTGACTCATCTCAAACCAGGAGATCATGCACTCCCTGTATTCACTGGAGAGTGTGGGGAATGCCCACATTGTAAGTCTGAAGAGAGCAACATGTGTGAACTGCTAAGGGTCAGCGTTACTAGGGGTGTTATGCTCAATGACGGTAAGACAAGATTCTCCAAAAATGGACAGCCCATATACCACTTTGTGGGAACCTCTACATTTAGTGAATACACTGTTGTCCATGCTAAATGTGTTGCAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTATTCTCAGTTGCGGATTCTGCACAGGATTTGGTGCTACTGTAAACGTGGCAAAACCGAAGCCTGGTTCTTCTGTAGCTATATTTGGATTGGGAGCTGTTGGCCTTGCTGCTGCTGAAGGGGCTAGGATATCTGGTGCTTCTAGAATCATTGGGGTTGATTTAATTTCCAGCCGATTTGAACAAGCCAAAAATTTTGGAGTCACTGACTTTGTGAACCCAAAAGATCATGACAAACCTGTACAACAGGTAATTGTTGAAATGACTAACGGAGGAGTTGACCGTGCACTTGAATGTACTGGAAACGTCGAAGCCTCGATAGCAGCATTTGAATGTGTTCATGATGGTTGGGGTGTAGCTGTACTTGTTGGTCTGCCAAAAGATGATGCTGTTTTCAAAACTCACCCTTCGAATTTCTTATTTGAGAGGACCATTAAGGGTACCTTCTATGGAAACTACAAACCGCTCACTGATCTTCCATCTGTTGTGGAGAAGTACATGAACAAGGAGCTAGAACTGGAGAAATTCATCACTCACTCAGTTCCATTTTCGGAGATTAACAAATCATTTGAATACATGCTGAAAGGGGAGTCAATCAGGTGTGTCATCCGCATGGAAGGCTAA 1143 0.4514 MSSKAGQVIKCKAAVAWEACKPLVIEEIEVAPPQAGEVRLKILYTSLCRSDVNYWDCKGHTSIFPRILGHEAAGIVESIGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCELLRVSVTRGVMLNDGKTRFSKNGQPIYHFVGTSTFSEYTVVHAKCVAKINPAAPLDKVCILSCGFCTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLISSRFEQAKNFGVTDFVNPKDHDKPVQQVIVEMTNGGVDRALECTGNVEASIAAFECVHDGWGVAVLVGLPKDDAVFKTHPSNFLFERTIKGTFYGNYKPLTDLPSVVEKYMNKELELEKFITHSVPFSEINKSFEYMLKGESIRCVIRMEG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2531g00033 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Gabi2531g00033 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Gabi2531g00033 380 Pfam Zinc-binding dehydrogenase 206 326 IPR013149 -
Gabi2531g00033 380 PANTHER ALCOHOL DEHYDROGENASE 6 376 - -
Gabi2531g00033 380 SUPERFAMILY GroES-like 5 186 IPR011032 -
Gabi2531g00033 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Gabi2531g00033 380 CDD alcohol_DH_plants 9 377 - -
Gabi2531g00033 380 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Gabi2531g00033 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Gabi2531g00033 380 Gene3D - 183 321 - -
Gabi2531g00033 380 Gene3D - 21 370 - -
Gabi2531g00033 380 SMART PKS_ER_names_mod 18 376 IPR020843 GO:0016491
Gabi2531g00033 380 SUPERFAMILY GroES-like 329 377 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2531g00033 Gabi-Chr2531 250069 258645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2531g00033 37 370 Monolignol Biosynthesis Gene Families AT1G72680 26.012 1.02e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2531g00033 K18857 - gmx:100783858 661.759