Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2531g00032 ATGGAAAACATTTCATCCATGTCTAGCAAAGCTGGTCAGGTCATCAAGTGCAAAGCTGCGGTGGCGTGGGAAGCATGCAAGCCACTAGTGATTGAAGAAATAGAGGTAGCTCCACCACAGGCTGGTGAAGTTCGTTTGAAGATCCTCTACACCTCCCTTTGTCGTTCTGATGTTAACTACTGGGACTGCAAGGGCCATACTTCGATTTTTCCCCGTATACTTGGTCACGAAGCTGCAGGGATTGTGGAGAGCATAGGAGAGGGTGTGACTCATCTCAAACCAGGAGATCATGCACTCCCTGTATTCACTGGAGAGTGTGGGGAATGCCCACATTGTAAGTCTGAAGAGAGCAACATGTGTGAACTGCTAAGGGTCAGCGTTACTAGGGGTGTTATGCTCAATGACGGTAAGACAAGATTCTCCAAAAATGGACAGCCCATATACCACTTTGTGGGAACCTCTACATTTAGTGAATACACTGTTGTCCATGCTAAATGTGTTGCAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTATTCTCAGTTGCGGATTCTGCACAGGATTTGGTGCTACTGTAAACGTGGCAAAACCGAAGCCTGGTTCTTCTGTAGCTATATTTGGATTGGGAGCTGTTGGCCTTGCTGCTGCTGAAGGGGCTAGGATATCTGGTGCTTCTAGAATCATTGGGGTTGATTTAATTTCCAGCCGATTTGAACAAGCCAAAAATTTTGGAGTCACTGACTTTGTGAACCCAAAAGATCATGACAAACCTGTACAACAGGTAATTGTTGAAATGACTAACGGAGGAGTTGACCGTGCACTTGAATGTACTGGAAACGTCGAAGCCTCGATAGCAGCATTTGAATGTGTTCATGATGGTTGGGGTGTAGCTGTACTTGTTGGTCTGCCAAAAGATGATGCTGTTTTCAAAACTCACCCTTCGAATTTCTTATTTGAGAGGACCATTAAGGGTACCTTCTATGGAAACTACAAACCGCTCACTGATCTTCCATCTGTTGTGGAGAAGTACATGAACAAGGAGCTAGAACTGGAGAAATTCATCACTCACTCAGTTCCATTTTCGGAGATTAACAAATCATTTGAATACATGCTGAAAGGGGAGTCAATCAGGTGTGTCATCCGCATGGAAGGCTAA 1161 0.4496 MENISSMSSKAGQVIKCKAAVAWEACKPLVIEEIEVAPPQAGEVRLKILYTSLCRSDVNYWDCKGHTSIFPRILGHEAAGIVESIGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCELLRVSVTRGVMLNDGKTRFSKNGQPIYHFVGTSTFSEYTVVHAKCVAKINPAAPLDKVCILSCGFCTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLISSRFEQAKNFGVTDFVNPKDHDKPVQQVIVEMTNGGVDRALECTGNVEASIAAFECVHDGWGVAVLVGLPKDDAVFKTHPSNFLFERTIKGTFYGNYKPLTDLPSVVEKYMNKELELEKFITHSVPFSEINKSFEYMLKGESIRCVIRMEG 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2531g00032 386 CDD alcohol_DH_plants 15 383 - -
Gabi2531g00032 386 Gene3D - 189 327 - -
Gabi2531g00032 386 Pfam Alcohol dehydrogenase GroES-like domain 42 169 IPR013154 -
Gabi2531g00032 386 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Gabi2531g00032 386 FunFam alcohol dehydrogenase 1-like isoform X1 25 188 - -
Gabi2531g00032 386 SUPERFAMILY GroES-like 11 192 IPR011032 -
Gabi2531g00032 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 175 348 IPR036291 -
Gabi2531g00032 386 SMART PKS_ER_names_mod 24 382 IPR020843 GO:0016491
Gabi2531g00032 386 PANTHER ALCOHOL DEHYDROGENASE 12 382 - -
Gabi2531g00032 386 FunFam Alcohol dehydrogenase class-P 189 327 - -
Gabi2531g00032 386 SUPERFAMILY GroES-like 335 383 IPR011032 -
Gabi2531g00032 386 Pfam Zinc-binding dehydrogenase 212 332 IPR013149 -
Gabi2531g00032 386 Gene3D - 27 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2531g00032 Gabi-Chr2531 250069 262879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2531g00032 43 376 Monolignol Biosynthesis Gene Families AT1G72680 26.012 1.09e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2531g00032 K18857 - gmx:100783858 661.759