Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2531g00031 ATGAGCTTGGGTGCGGCTGAGGAAGAATCAGGAGCAGAGGTTCATGTCCCAGCTGATATTGATTGGGAAAAGCTTGATAAATCAAAGTTCTTCTTGCTGGGTGCAGCACTTTTCTCTGGGGTTTCAGCAACTCTGTACCCTATTGTTGTGTTGAAAACCCGGTTGCAAGTAGCTCAATCTCAAGCTTCTTGCATCAAGAGTGCATTTTCAGTGATCAGGGTTGAGGGTTTTAGAGCATTGTACAGAGGGTTTGGGACTTCTTTGATGGGTACAATCCCTGCTAGAGCCTTATATATGGCTGCACTTGAGGTTACCAAGAGTAATGTAGGTACTGCTACCCTTAGTTTTGGGCTAGCTGAACCAACTGCTGCTACAATTGCCAATGCAGCTGCAGGATTGAGTGCAGCCATGGCAGCTCAACTTGTGTGGACCCCAGTTGATGTTGTGAGCCAGAGGTTGATGGTTCAAGGTGGTTCTAGTTCTTCACCTCAATATATCAATGGGATTGATGCCTTTAGGAAAATTCTTAGGACAGATGGTCTTAGGGGATTCTATAGGGGTTTTGGGATATCCATTTTGACATATGCACCTTCAAATGCAGTTTGGTGGGGTTCATATTCTGTTGCACAAAGGCTGCTTTGGGGTGGAGTTGGATACTACTTGTGTAAGAAAGATGATAATGATGAGAGGAGTGGTAATGCAGCTAATGAATTGAGGCCAGATTCAAAAACAGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCTGGTGGAATGTGTGCTTTGATTACCATGCCACTGGATACAATCAAGACAAGATTGCAGGTCTTGGATGGTGATGAGAATGGGCGTCGTGGACCAACAGTTATGCAGACACTGAGGAATTTGGTTAAGGAAGGTGGTTGGATGGCTTGTTACAGAGGGTTGGGACCTAGATGGGCTTCAATGTCAGTGTCTGCCACAACAATGATCATTACTTATGAGTTCCTAAAACGACTTTCCACGAAAAATCAAGAGGTTTTGACTTGA 1029 0.448 MSLGAAEEESGAEVHVPADIDWEKLDKSKFFLLGAALFSGVSATLYPIVVLKTRLQVAQSQASCIKSAFSVIRVEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATLSFGLAEPTAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGGSSSSPQYINGIDAFRKILRTDGLRGFYRGFGISILTYAPSNAVWWGSYSVAQRLLWGGVGYYLCKKDDNDERSGNAANELRPDSKTVMAVQGVSAAMAGGMCALITMPLDTIKTRLQVLDGDENGRRGPTVMQTLRNLVKEGGWMACYRGLGPRWASMSVSATTMIITYEFLKRLSTKNQEVLT 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2531g00031 342 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 339 - -
Gabi2531g00031 342 Gene3D Mitochondrial carrier domain 29 340 IPR023395 -
Gabi2531g00031 342 SUPERFAMILY Mitochondrial carrier 23 330 IPR023395 -
Gabi2531g00031 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 108 IPR018108 -
Gabi2531g00031 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 212 IPR018108 -
Gabi2531g00031 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 333 IPR018108 -
Gabi2531g00031 342 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Gabi2531g00031 342 PRINTS Mitochondrial carrier protein signature 40 58 IPR002067 GO:0055085
Gabi2531g00031 342 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Gabi2531g00031 342 Pfam Mitochondrial carrier protein 125 214 IPR018108 -
Gabi2531g00031 342 Pfam Mitochondrial carrier protein 36 108 IPR018108 -
Gabi2531g00031 342 Pfam Mitochondrial carrier protein 247 337 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2531g00031 Gabi-Chr2531 246241 247644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2531g00031 1 339 Chloroplast and Mitochondria Gene Families AT1G72820 73.410 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2531g00031 K15121 - qsa:O6P43_027580 532.717