Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2531g00005 ATGGACATTAGTCCTTACATTTCAAAGAAAAAACACTTCAATATTGGTCATATTGAAGCAGCAGCCATAGACATGCACCGAGGCAACCATCCCCAACACAGTAGTCACACGTCAACAAGCCGTTCTTCTGATTCCAGCGAGCCATGTGAGGATGGAAAATGGGCCTCAAAACTTCTGAGGGAGTGTGCTAAAGCAATATCAGAGAGAGACTCAAGCAAAATCCAACATCTTCTATGGATGTTAAACGAGCTCTCTTCTCCCTATGGTGACAGTGATCAGAAATTAGCTTATTACTTCTTGCAAGCTCTATTTTGCAAGGCCACAGAATCTGGCCTAAGATGCTATAAGACTCTCTCCTCAGTTGCTGAGAAAAACAACAACTTCGATTCAGCAAGAAAGTTAATACTCAAGTTTCAAGAGGTAAGTCCTTGGACAACTTTTGGACATGTGGCTTCAAATGGTGCCATATTAGAAGCCTTAGAAGGAGAGACTAAACTTCACATAATTGATATTAGCAACACCCTTTGCACTCAGTGGCCTACTCTTTTGGAAGCCTTGGCCACAAGAAATGATGAAACTCCTCACTTGAAGCTCACGGTTGTTGTTGTAACTGCCAACATAGTAGGATCCGTCATGAATGAAGTTGGACAAAGAATGGAGAAGTTTGCAAGGCTAATGGGTGTTCCCTTTGAATTTAATGTGATTAGTGGGTTGAATCATCTAGGAGAGCTCACAAAAGAAGGGTTAGGAGTTCAAGAAGATGAGGCTATTGCTGTGAATTGTATTGGGGCATTGAGAAGAGTTGAAGTTGAAGACAGAGAAGCTGTGATTAGCATGTTCAAATCTCTTAGTCCAAGAGTGGTGACAGTTGTTGAGGAAGAAGCTGATTTTTGCAGCTCAAGAGATGACTTTGTGAAGAGTTTTGATGAGTGTCTTAAGTTTTACACACTCTACTTTGAGACGCTAGAGGAAAGCTTTCCCCCAACAAGTAATGAGAGATTGATGTTAGAAAGGGAGTGTTCAAGGAGCATAGTTAGGGTTTTGGCTTGTAGTAGTGATGAATTTGAAGATGGTGAAGGTGATTATTATTGTGAGAGAAGGGAGAGAGGAATCCAATGGTTTGAAAGGCTTAAGAATGCATTCACCTCAATTGGATTCAGTGATGATGTTGTTGATGATGTCAAAGCATTGCTCAAGAGGTACCGAGGAGGGTGGTCACTTGTGGTGCCTCAAGGAGATGATCATCTCTCAGGAATTTACTTGACATGGAAGGAGGAACCAGTAGTTTGGGCATCAGCATGGAAACCCTAG 1311 0.4188 MDISPYISKKKHFNIGHIEAAAIDMHRGNHPQHSSHTSTSRSSDSSEPCEDGKWASKLLRECAKAISERDSSKIQHLLWMLNELSSPYGDSDQKLAYYFLQALFCKATESGLRCYKTLSSVAEKNNNFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTVVVVTANIVGSVMNEVGQRMEKFARLMGVPFEFNVISGLNHLGELTKEGLGVQEDEAIAVNCIGALRRVEVEDREAVISMFKSLSPRVVTVVEEEADFCSSRDDFVKSFDECLKFYTLYFETLEESFPPTSNERLMLERECSRSIVRVLACSSDEFEDGEGDYYCERRERGIQWFERLKNAFTSIGFSDDVVDDVKALLKRYRGGWSLVVPQGDDHLSGIYLTWKEEPVVWASAWKP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2531g00005 436 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 425 IPR005202 -
Gabi2531g00005 436 ProSiteProfiles GRAS family profile. 46 435 IPR005202 -
Gabi2531g00005 436 Pfam GRAS domain family 57 435 IPR005202 -
Gabi2531g00005 436 MobiDBLite consensus disorder prediction 27 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2531g00005 Gabi-Chr2531 63909 65219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2531g00005 29 436 GRAS Transcription Factor Family AT4G37650 53.176 9.70e-150 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2531g00005 GRAS 7.5e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2531g00005 - - gmx:100818806 669.848