Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2531g00002 ATGACAAAGGTGCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAAGAGCTCCGTGTTAAGGGAACTTATCTCCATCACAAACAAATCAAAGCTGCAATGGGTATAAAGATTACTGCCCAGGGGCTTGAACATGCTATAGCTGGCACTGGTTTATATGTGGTGAACCCTGATGATGACTTGGAAGATGTTAAAGAAGCAACAATGGAAGATATGCGGTCAGTCATGAGCAGGATTGACAGGAGCGGAGAGGGTGTTTGTGTACAGGCATCTACCCTTGGCTCCTTGGAGGCATTACTGGAATTTTTGAAAACTCCTGAAGTGAATATTCCTGTTAGTGGTATAAGCATAGGCCCTGTACATAAAAAGGATGTAATGAAGGCCAGTGTAATGCTTGAAAAGACACGAGAGTATGCTACTATATTGGCATTTGATGTCAAAGTCACTCCTGAGGCTAGAGAACTTGCAGATGAATTGGGTGTGAAAATTTTCATCGCTGATATCATTTATCATCTGTTTGATCAATTTAAGGCTTATATTGACAACATTAAGGAGGAGAAAAAGAGAGAAGTTGCTGATGAGGCAGTCTTCCCATGTGTTCTGAAAATCTTACCGAATTGCATTTTCAACAATAAGGATCCAATTGTTTTGGGAGTTGATATACTTGAAGGCATTGCAAAGGTTGGGACTCCTATTTGTATTCCTTCCAGAGAGTTCATTGATATTGGCCGCATTGCCTCGATTGAGAACAACCATAAACCTGTTGATTATGCGAAGAAGGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAACTCCGAGGAGCAACAAAAAATGTATGGGAGGCATTTTGAGATTGATGATGAACTTGTAAACCATGTTTCACGGAGATCTATTGATATACTCAACACTAATTATCGGGATGATCTTAATAGGGAGGAATAG 957 0.4044 MTKVPIVTTIRALLTPHPMKELRVKGTYLHHKQIKAAMGIKITAQGLEHAIAGTGLYVVNPDDDLEDVKEATMEDMRSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKTREYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNIKEEKKREVADEAVFPCVLKILPNCIFNNKDPIVLGVDILEGIAKVGTPICIPSREFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMYGRHFEIDDELVNHVSRRSIDILNTNYRDDLNREE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2531g00002 318 FunFam Eukaryotic translation initiation factor 5B 195 318 - -
Gabi2531g00002 318 Pfam Translation-initiation factor 2 66 181 IPR023115 -
Gabi2531g00002 318 Gene3D Translation factors 1 83 - -
Gabi2531g00002 318 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 5 315 IPR015760 -
Gabi2531g00002 318 Gene3D Translation factors 195 318 - -
Gabi2531g00002 318 FunFam Eukaryotic translation initiation factor 5B 82 188 - -
Gabi2531g00002 318 SUPERFAMILY Translation proteins 5 60 IPR009000 -
Gabi2531g00002 318 CDD IF2_aeIF5B_IV 203 295 - -
Gabi2531g00002 318 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 65 195 IPR036925 -
Gabi2531g00002 318 Gene3D - 84 188 IPR036925 -
Gabi2531g00002 318 SUPERFAMILY Translation proteins 199 316 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2531g00002 Gabi-Chr2531 10711 28151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2531g00002 5 318 Eukaryotic Initiation Factors Gene Family AT1G76810 82.803 1.04e-177 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2531g00002 K03243 - gmx:100814640 587.8