Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2527g00004 ATGACTGAAACTAGAGTTGGTAGACTCGGTTCAGAGTATGATCCTTGCACTGAGGGTCACTCCACTGTATACTTCAATCTACCTGAGGTCCAAAAGAAACTTCATGTTGATCCAAATCACAAGCCTGCTACATGGGAGACCTGCAGTGAACTCGTAAATAACAACTGGAAGGATTCTCCGAGAACAGTGCTCAATATTTATCATGAACTTATTCATTTCGGATTGAGGATATGGATGTTCAGTGGTAATACAGATACCGTAATCCCTGCGACATCTACTCGTTATAGCATAGATGCTCTCAAGCTTTCACCTTTGAGCCCTTGGCATGCATGGTATGATGATGGGGAAGTTGGAGGATGGACCCAAGAATATGATGGACTCACGTTTGTGGTTATAAGGGGTGCAGGGCATGAAGTTCCTTTGCATAAACCAAAACTTGCTCTTGCACTTTTCAAAGCCTTCTTAGCAGGAACCTCTATGCCTACCCTTGAGCTAGTCAGTGCCTCTTGA 510 0.4392 MTETRVGRLGSEYDPCTEGHSTVYFNLPEVQKKLHVDPNHKPATWETCSELVNNNWKDSPRTVLNIYHELIHFGLRIWMFSGNTDTVIPATSTRYSIDALKLSPLSPWHAWYDDGEVGGWTQEYDGLTFVVIRGAGHEVPLHKPKLALALFKAFLAGTSMPTLELVSAS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2527g00004 169 ProSitePatterns Serine carboxypeptidases, histidine active site. 127 144 IPR033124 GO:0004185
Gabi2527g00004 169 Pfam Serine carboxypeptidase 11 156 IPR001563 GO:0004185|GO:0006508
Gabi2527g00004 169 FunFam Carboxypeptidase 13 160 - -
Gabi2527g00004 169 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 144 IPR001563 GO:0004185|GO:0006508
Gabi2527g00004 169 Gene3D alpha/beta hydrolase 2 164 IPR029058 -
Gabi2527g00004 169 FunFam Carboxypeptidase 63 157 - -
Gabi2527g00004 169 SUPERFAMILY alpha/beta-Hydrolases 11 160 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2527g00004 Gabi-Chr2527 152282 154594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2527g00004 74 160 Calmodulin-binding Proteins AT2G22960 26.136 1.89e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2527g00004 K16297 - gmx:100805227 271.166