Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2522g00021 ATGTCTTCCTCTACCAAAAAGCATGACGTATTTCTTAGCTTTAGAGGAGAGGACATACGCACCACCTTCGTTAGCCATCTTCACAATGCTCTGAATAAAGCCAAACCAATCAGAACATTCATAGATTATGATATTCCTAGAGGAAAAGATGTTTGGCCAGCACTTATCCGGGCAATGAAGGACTCGCATATATCGGTTGTTATTTTCTCAGAAAATTATGCAACCTCTAAATGGTGCTTGGAAGAACTCTACAAAATACTCGAATGCAGAAAAGATCATGGTCAAGTTGTCATACCTGTTTTCTATAAAACAAATCCATCACACGTAAGGCATCAGAAGGGTAGTTACGAGAAAGCATTCGCCAAACATGAGCGAGATTCTGGGGACAAAGGCAGCAAATTAACAAGATCAACATCAAGATCAGCATCACTTTCATCCCTAACAAGAGACAGCAAATCCAACAAACAAAAAGTACTTAGGTGGAGAAAAGCTCTCACTGAAGCAGCCAATATATCTGGATGGGACTCTCGAAACCACAAGGATGAGACTCAACTCATCGAGATCATTGTGAATGATGTACTTCAAAAGCTGGACCTGAGGGAACCTATAGAACAAAAAGGCATTGTAATTGAAAAAAACTGTATAGATGTCGAATCATATATGAAAGAAAAACAAAAAATTGGAATTTGGGGCATGGGCGGAGTAGGTAAGACGACCATTGCTAAAGTCTTGTTTGCCAAACTCTTCCCTCAATATGACAATACCTGCTTTGTGGTGGCCAATGCAAAAGAACATTCCCTTGGTAAGCTTCACTTTGAGCTATTCAAGGAAGAAATTTCGACACCTAATGTTGTAGGATACTCATTTGATTTAAGGAGGCTCAGTGGTAAAAAAGTTTTCATTGTACTTGATGACGTGGATAATTCAATTCTAATTGAATATTTGTGTAGAGAGTACCATTACTTAAGTCCCGATAGTAGACTCATTATAACCACAAGAGACAGGAGATTTCTTGAAAACAGAGTTGATCTTATATATGAGGTCAAGAAATGGGAAGATACAGAATCTCTCGAGTTTTTTTGCTCAAAAGCCTTCGAACAAAGCAAACCCCAAATTGGTTTCGAGTTTCTCTCAGAAAGGGCAGTTGCTTATGCAGAGGGAGTTCCATTAGCTCTTGATGTTTTGGGTTCAAATCTTCGTTCCAAAAGTACTAAGTTTTGGGAGAGTACTCTCAGAAAACTCAACAATTATCCTGATGAGAAAATTCAAGGCTTGTTAAGAGTCAGCTATGATGATGGATTAGATCCTCTACAGAAGAAGATTTTTCGAGACATAGCATTTTTTTTCCAAGGAGAAGAGAAAGATCACGTCCAATCAGTTCTAGATGCATGTGGTTTCGAAGCAAGTAGCGGAATAGAAGTCCTTGAAGACAAAGCTTTGATAACTATTTCAAATGGCAATGGAATACAAATGCATAACTTGCTACAAATAATGGGTTTGGCAATAGTACGTAGAGAAGATGAAAATAATCCTGGAAGACGTAGCCGATTGAGGGACAATGAAGCTCGTGAAGTAATTGAGAAAAACAAGGGGACTGATGCAATTCAAGGCATAACATTAGATTTGTCTCAAATTAAAGATTTTCGTTTGCCTACTGACACATTCACAAAGATGGAATCCTTAAGATTTCTTAAATTATATACTCCTTCAGGTCAGAGTTGTTCTAGTGATACATACATCGACCTTCCTGCAGTTCTTGAGCCATTTTCTGACAAACTGAGGTATGTTGAGTGGACGGGGTACCCATTTGAGTCTCTTCCATCACCTTTTTGTGCTAAGTTGCTTGTTGAGATTCGCATGCCACACAGTAATGTTAAACAACTTTGGCAGGGGACGCAGGAACTTGATAATTTGGAGGGAATCGACCTAAGTGAATGCAAAAAGTTTGAAAACCTTCCAGATTTGTCTAAGGCTTCAAGACTAAAATGGGTGAATCTCTCCGGTTGTGAGAGTTTGTATGATCTTCATGATTCTGTTTTATCGGCCGATACATTTGTTACTTTGTTACTGGATAAGTGTACAAGGCTTAAGAGTGTTAAAGGAAAGAAGCATTTAAAATCTCTAAAGACGATCAGTGTCATTGGCTGCTCAAGCCTGGAGGAATTTGCAGTGTCTTCAGAATTACTAGAAAACTTGGATTTAAGCAATACAGGAATCCAAAGATTGGACACATCAATTGGGCTTCTAAAGAATCTTAAATGGCTTTATCTAGATGGTTTAAGACTGGGGCATCTTCCAAAGGAGTTATCTTGCCTGAAATGTCTTAGGGAGTTGAAGCTTTCTGACAGTGGACTTGTTATTGACAAACAGCAGCTACATGATTTGTTTGATGGCTTACAGTTTCTACAAATACTACATTTGAAGGAGTGTAGTTGCTTGTTTGAACTCCCTGACAACATCAGTATCTTATCAAAAACATTACAGGAATTAAGGCTAGATGGAAGCAATGTGACAAAGTTGCCTGAAAGCATCAAGGATCTTCAAGAGCTTGAAATTCTGTCCTTGGAAAATTGCAGGGAGCTTCCGTGCCTACCAGAGCTTCCACCCCACATCAAACAGCTATATGTCGTTGACTGCAAGTCATTGGTGTCCGTGTCAAATTTGAAGACTTTGGCAAAAAAGATGTTAGGAAAGGCTAAACACATTTCATTCAAGAACAGCTTGAAATTGGATGGACATTCACTCAAATGTATTGAGGAAAGCCTCCATTTAACAATGATGTGTGCAGCATTTCAAAATGTGATAGTGAGAAATTCCCATGAGGTCGTCCTCAGCTTCAATTATAACAGTGTTGAGGTTTGTTTACCAGGAAGCGGAGTCCCAATTCAGGTCAATTACACAACAGAAGAGTCCTCAATTACCATTAATATTCCTAACCGTTCCAACTTGTTGGGCTTCATTTACTATGTGGTTCTTTCTCCTTTCTGTGGAATGAAGAAACATGGCACTAAATTAAAATGTGAATGCCCCTTGGCAGAAGGTACAAAGGTTACATGGCTAAAGATTGATATCACAGAATTGGACTCTGATCATGTTTGTGTATGGTATGATCCATTCCATTGTGACAGCATTCTTAATTCTAATGAACAAAAGGTTCGTTTTGACTTCTGTGTTGCAAATGATAAGGGGGAAGTTGATGGTTCCATCCGTGTTAAAGAGTGTCGGGTACACCTCATAAGTGTGTCAGAATTACCCAGTGTTTTACCGGAACTGGACTTGGATTCTTATAAGAAAATGGACTTGCAGAAGGGATTGGAGTTGGAATCAGGATATAGCATAACCTTCACATCAATTGAAAGACCTGATGTCACAGAAACAAAGTCAGCGCCGGTTGAAGAAGATAGTGGGAGGAAAGACCATTTTTTTGATGTGGAAAGGAGCTTCGGATCCACTCACAAGGAAACCAAGACCAGTGCAGGAAGAGGTCTCATGGAGAATACCATAGAATCTACCAAATTTGTCAAAAGCAAAGGTACTGAAGTAACGCACACTGAATCTGCTGCTGGATTGCATCTACATGTGGTGTTCGATGACCAAGAAAGTGCTTCTTATTTTTTGGAAGAAAATGCTTCTAAGGATAAGTCAAGCGAAAACAACTCTTATTGGAAAGATAATATTGAAGAGGCCAAGCATCCAAAAGTAGAAAATGATCAAAATCTACAAGGAGGACAAAACATTGTTCATTTGATTGTTAAGGAAAAAGAGAATGAACCAACAACGGATGTTGACAAACCTGAAAGTCAAGATAGCTCAGATGAGGACCCCTTTGCTGAACTTGATACCATCCTCTTGGAAATGAGTGGAAAGTTCTCAGCAAAAGCAATCACTTCTTCTACAACCGATGTTGTTGCTATAAGAGAAGCTTTGCATAATCTTGAATGCCTAATGCAAGACTCGCTCGAGTCCATTCTCGGGGACATGGAACTACAACAACAATTACGTGTATCTTTGCAATGCATAGAACAAGGATCCGATATTGAAAAAGTTTCTCCACATGTTGCGAAACTTGTTGGAAGCATGACATCCTCTATTGAGGATCTGTTCAATGACTTTACCTCGACTCAACAAGTAGTCGAAGATCACAATGTCCGTTTGAAAAAAAGAAAAAAGCTTGAGCAGATAGGGACAGATGGTAAGAAACGGAGGGATATAGTGAAAGAAGAAATGAGTAAATGTAAGTTTGAAACCCAAGGTCTCGACAAAGAGGCTAAAAAGCTGGATGAAGAGATTCGAATTCTTGTTGAACAGAGGGAAACTGTTGAGTTGAAAAGAACCAAGTTGAAGGAGACCCTGGAAATATTTGATTGTGAAAAGAAGAAGCTGAATGATGAAGCAAAGAATTGGGTCACTGAAAGCAAAGAGCTGAAGTTGGCCATTGAGAAATCTGAATCCTCATACGCTGATGCCCTGTCTGAGCGGAAGAAACTGAATGATAGATGGGAAGGTTTCAAAACAGCTTTTGCAGAGCTGTGA 4533 0.3922 MSSSTKKHDVFLSFRGEDIRTTFVSHLHNALNKAKPIRTFIDYDIPRGKDVWPALIRAMKDSHISVVIFSENYATSKWCLEELYKILECRKDHGQVVIPVFYKTNPSHVRHQKGSYEKAFAKHERDSGDKGSKLTRSTSRSASLSSLTRDSKSNKQKVLRWRKALTEAANISGWDSRNHKDETQLIEIIVNDVLQKLDLREPIEQKGIVIEKNCIDVESYMKEKQKIGIWGMGGVGKTTIAKVLFAKLFPQYDNTCFVVANAKEHSLGKLHFELFKEEISTPNVVGYSFDLRRLSGKKVFIVLDDVDNSILIEYLCREYHYLSPDSRLIITTRDRRFLENRVDLIYEVKKWEDTESLEFFCSKAFEQSKPQIGFEFLSERAVAYAEGVPLALDVLGSNLRSKSTKFWESTLRKLNNYPDEKIQGLLRVSYDDGLDPLQKKIFRDIAFFFQGEEKDHVQSVLDACGFEASSGIEVLEDKALITISNGNGIQMHNLLQIMGLAIVRREDENNPGRRSRLRDNEAREVIEKNKGTDAIQGITLDLSQIKDFRLPTDTFTKMESLRFLKLYTPSGQSCSSDTYIDLPAVLEPFSDKLRYVEWTGYPFESLPSPFCAKLLVEIRMPHSNVKQLWQGTQELDNLEGIDLSECKKFENLPDLSKASRLKWVNLSGCESLYDLHDSVLSADTFVTLLLDKCTRLKSVKGKKHLKSLKTISVIGCSSLEEFAVSSELLENLDLSNTGIQRLDTSIGLLKNLKWLYLDGLRLGHLPKELSCLKCLRELKLSDSGLVIDKQQLHDLFDGLQFLQILHLKECSCLFELPDNISILSKTLQELRLDGSNVTKLPESIKDLQELEILSLENCRELPCLPELPPHIKQLYVVDCKSLVSVSNLKTLAKKMLGKAKHISFKNSLKLDGHSLKCIEESLHLTMMCAAFQNVIVRNSHEVVLSFNYNSVEVCLPGSGVPIQVNYTTEESSITINIPNRSNLLGFIYYVVLSPFCGMKKHGTKLKCECPLAEGTKVTWLKIDITELDSDHVCVWYDPFHCDSILNSNEQKVRFDFCVANDKGEVDGSIRVKECRVHLISVSELPSVLPELDLDSYKKMDLQKGLELESGYSITFTSIERPDVTETKSAPVEEDSGRKDHFFDVERSFGSTHKETKTSAGRGLMENTIESTKFVKSKGTEVTHTESAAGLHLHVVFDDQESASYFLEENASKDKSSENNSYWKDNIEEAKHPKVENDQNLQGGQNIVHLIVKEKENEPTTDVDKPESQDSSDEDPFAELDTILLEMSGKFSAKAITSSTTDVVAIREALHNLECLMQDSLESILGDMELQQQLRVSLQCIEQGSDIEKVSPHVAKLVGSMTSSIEDLFNDFTSTQQVVEDHNVRLKKRKKLEQIGTDGKKRRDIVKEEMSKCKFETQGLDKEAKKLDEEIRILVEQRETVELKRTKLKETLEIFDCEKKKLNDEAKNWVTESKELKLAIEKSESSYADALSERKKLNDRWEGFKTAFAEL 1510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2522g00021 1510 Gene3D - 351 434 IPR042197 -
Gabi2522g00021 1510 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 174 IPR035897 -
Gabi2522g00021 1510 PRINTS Disease resistance protein signature 845 861 - -
Gabi2522g00021 1510 PRINTS Disease resistance protein signature 226 241 - -
Gabi2522g00021 1510 PRINTS Disease resistance protein signature 385 399 - -
Gabi2522g00021 1510 PRINTS Disease resistance protein signature 293 307 - -
Gabi2522g00021 1510 MobiDBLite consensus disorder prediction 1255 1274 - -
Gabi2522g00021 1510 Pfam NB-ARC domain 222 420 IPR002182 GO:0043531
Gabi2522g00021 1510 MobiDBLite consensus disorder prediction 134 151 - -
Gabi2522g00021 1510 Gene3D - 4 193 IPR035897 -
Gabi2522g00021 1510 MobiDBLite consensus disorder prediction 1255 1271 - -
Gabi2522g00021 1510 Pfam TIR domain 7 127 IPR000157 GO:0007165
Gabi2522g00021 1510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 445 IPR027417 -
Gabi2522g00021 1510 SMART till_3 7 171 IPR000157 GO:0007165
Gabi2522g00021 1510 MobiDBLite consensus disorder prediction 120 151 - -
Gabi2522g00021 1510 Gene3D - 194 345 IPR027417 -
Gabi2522g00021 1510 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 199 - -
Gabi2522g00021 1510 Coils Coil 1416 1499 - -
Gabi2522g00021 1510 ProSiteProfiles TIR domain profile. 6 197 IPR000157 GO:0007165
Gabi2522g00021 1510 Pfam Leucine Rich Repeat 615 633 IPR011713 -
Gabi2522g00021 1510 Gene3D Ribonuclease Inhibitor 503 727 IPR032675 -
Gabi2522g00021 1510 Gene3D Ribonuclease Inhibitor 728 923 IPR032675 -
Gabi2522g00021 1510 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 723 IPR044974 GO:0006952
Gabi2522g00021 1510 SUPERFAMILY L domain-like 540 880 - -
Gabi2522g00021 1510 SUPERFAMILY "Winged helix" DNA-binding domain 421 506 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2522g00021 Gabi-Chr2522 213186 224749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2522g00021 799 976 WRKY Transcription Factor Family AT4G12020 26.404 9.78e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2522g00021 - - cam:101515491 1618.59