Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2522g00002 ATGAAGAAAGAAAACAATGTCACGTTGAAAGCTGGGGAGCTTCCTGGTCGATTGACTCGTGCTCGAGCTGCTGCTTTTCGTGCATCTGGAAAGCTTTCCCCTTTGAAGGAGTCAACACAGAGAAATCGGAAGCAACCACCAAAAAGAGCAGTTTCTGATAATACATCTCTTCAAAGTAAAAAGAGGGTTGTTCTTAAGGATGTTACTAATGTTTGCAGTGAAAATGCACAAAAGGGCAATTTCAATTCAACTAAAATTCAGGCTAAGAAAAGAAAGCTGGCTAAGGCTGGTCAAATTAATGTTTCCAAAGTGGCTTCTTCTGTTGCTGTGGATCTACCAAAACTTCAAGTTGAATCCAAAGCAAAGAGTTTAAAGGAAACAGAATTAAAATCAGAAGATGCTATGTACTCAATTAACTTGGAAAACAATGCACTTCTGCGGCTGGGTGCCAATGAGTGTAGCAAGGATGGTAGTCTTCCTGAAAGTCTGACGTTTGGAATATCTACTCATGCTTTGATTTCTCAGAAGAAAGGTATGCAAACTGTTGCAGCCAAGAAAGGTAACCTTTCTGAATTTTTGAGTGGATTGAAAGACCCAAACATCATTAATATAGATGATGATCTTGAAGATCCTCAATTTTGCAAGCTCTATGCTGCTGATATCTATGGAAACTTGCGTGTTGCTGAGCTAGCAAGAAGGCCGTATGCTAATTTTATGGAAAAGGTGCAGCGAGATATCACTCAAAGCATGCGTGGAATACTGGTTGATTGGCTAGTTGAGGTTTCTGAGGAATACAAATTGGTACCAGACACTCTTTATCTCACTGTATATCTCATTGATTGGTTTCTCTCCAAAAATTACATTGAAAGACAAAAACTTCAGCTACTTGGCATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATCAATGCCCCTCGTATTGAAGATTTCTGCTTCATCACAGACAATACATACACGAAAGTGGAGGTACTAAAAATGGAGAGTCAAGTGTTAAAGTCGTCTGAATATCAACTGTTTGCTCCTACTACACAAACTTTCCTCAGGAGGTTTCTTCGAGCAGCACAAGCTTCATACCAGGGTCCAAGACTTGAATTGGAGTACCTGGCCAATTATCTAGCTGAACTAACACTAATGGACTATGGTTTCTTGAAATTCTTACCCTCAATAATTGCTGCATCAGCTGTATTTCTTGCTAGATGGACACTAGATCAGTCAAACCACCCATGGAATCAAACTCTTCAACACTATGCCTTTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCATTGCAAGACCTACATCTGAATTTCAATGGATGCCCTCTAACTTCCATCCGCACCAAGTACAGACAAGACAAGTTTAAATGTGTAGCGGCTTTGTCTTCACCAAAACTGCTTGAAACTCTGTTCTGA 1440 0.4 MKKENNVTLKAGELPGRLTRARAAAFRASGKLSPLKESTQRNRKQPPKRAVSDNTSLQSKKRVVLKDVTNVCSENAQKGNFNSTKIQAKKRKLAKAGQINVSKVASSVAVDLPKLQVESKAKSLKETELKSEDAMYSINLENNALLRLGANECSKDGSLPESLTFGISTHALISQKKGMQTVAAKKGNLSEFLSGLKDPNIINIDDDLEDPQFCKLYAADIYGNLRVAELARRPYANFMEKVQRDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVYLIDWFLSKNYIERQKLQLLGITCMLIASKYEEINAPRIEDFCFITDNTYTKVEVLKMESQVLKSSEYQLFAPTTQTFLRRFLRAAQASYQGPRLELEYLANYLAELTLMDYGFLKFLPSIIAASAVFLARWTLDQSNHPWNQTLQHYAFYKASDLKTTVLALQDLHLNFNGCPLTSIRTKYRQDKFKCVAALSSPKLLETLF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2522g00002 479 PIRSF Cyclin_A_B_D_E 17 478 IPR046965 GO:0016538|GO:0044772
Gabi2522g00002 479 FunFam Cyclin A1 336 468 - -
Gabi2522g00002 479 Pfam Cyclin, N-terminal domain 220 345 IPR006671 -
Gabi2522g00002 479 CDD CYCLIN_AtCycA-like_rpt2 349 463 - -
Gabi2522g00002 479 SMART cyclin_7 353 441 IPR013763 -
Gabi2522g00002 479 SMART cyclin_7 256 340 IPR013763 -
Gabi2522g00002 479 SUPERFAMILY Cyclin-like 349 474 IPR036915 -
Gabi2522g00002 479 Pfam Cyclin, C-terminal domain 349 471 IPR004367 -
Gabi2522g00002 479 SMART Cyclin_C_2 349 472 IPR004367 -
Gabi2522g00002 479 CDD CYCLIN_AtCycA_like_rpt1 210 345 - -
Gabi2522g00002 479 MobiDBLite consensus disorder prediction 26 59 - -
Gabi2522g00002 479 Gene3D - 220 468 - -
Gabi2522g00002 479 FunFam Mitotic cyclin 6 234 334 - -
Gabi2522g00002 479 PANTHER CYCLINS 139 430 IPR039361 -
Gabi2522g00002 479 SUPERFAMILY Cyclin-like 209 345 IPR036915 -
Gabi2522g00002 479 Gene3D - 234 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2522g00002 Gabi-Chr2522 19458 24203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2522g00002 1 479 Core Cell Cycle Gene Families AT1G80370 53.388 1.27e-166 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2522g00002 K06627 - gmx:100793657 692.189