Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi251g00014 ATGCTAAGTGGAGGCGCAGCCATATGCAACATGAGGAAGACATGGTTATGGTTTTCTCTTCTCACCCTCTTCTTCTCTTTCCACACCTACCCTTCCCTTGCAGCACCTCTCACCACCATCTCTGCAAACCAATCTCTCTCAGGTGACCAAACTCTGCTATCTCAAGGTGGGATCTTTGAACTGGGTTTCTTCAAGCCAGATTTTCTATGGCAGAGTTTTGATCATCCAACAGATACATGGCTTCCAGGTGGCAAAATTAAACTTGATAATAAAACAAAGAAGCCTCAATATCTCACTTCATGGAAGAATAATCAAGATCCTGCAACGGGTCTCTTTTCTCTTGAACTAGACCCTAAAGGAACCACTTCATATCTTATTCTTTGGAATAAATCTGAAGAGTATTGGACAAGTGGCCCTTGGAATGGACACATTTTCAGCCTGGTACCCGAAATGAGGGCAAATTATATATACAATTTCACATTTGTGACAAACGAGAACGAGAGTTATTTCACCTACTCCATGTATAACTCTTCCATTATATCTCGGTTTGTTATGGATATCTCGGGGCAGATCAAGCAACTCTCGTGGTTGGATAATACTCAACAATGGAATTTGTTTTGGTCACAGCCAAGACGACAGTGTGAAGTTTATGCTTTCTGCGGTGCATTTGGGAGCTGCACTGAGTATTCAATGCCATTCTGTAACTGTTTAACTGGTTTTCAGCCCAAGTCACAATCTGACTGGGATCTAGGGGATCACTCAGGTGGGTGTAAGAGGAAAACCAATTTGCAATGCGGGAATTCCAATCCTTCTAATAGGGATAAGGATAGGTTCTTAGCAATCCCCAACATGGCATTACCTAAACATGCACAATCTGTGGGATCAGGGAATGTTGGGGAATGTGAATCAACCTGCTTGAACAACTGCTCCTGCATTGCTTATGCATATGGCAGTAATGGGTGTTCAATTTGGAATGGAGACCTACTGAATCTGCAACAACTATCTTCAGATGATAGTAGAGGAGAAACTATGTATCTCAAACTTGCAGCATCCGAGTTTCATGATGCTAAAAAGAGTAACGGGAAGATTATAGGTGTTGTTGTGGGGGCTGTTGTTGGCATAGGTGTTGTCCTGGCCCTTCTTTTATTTGTCATGATTAGGCGAAGGAGAATGGTTGGAACAGGAAAGCCTGTGGAGGGTTCATTGGTGGCATTTGGGTACAGAGATTTGCAAAATGCAACAAAGAATTTCTCTGATAAATTGGGAGGAGGAGGTTTTGGTTCTGTTTTCAAAGGAATGTTGGGTGATTCAAGTATCATAGCAGTGAAGAAGTTGGAAAGCATTAGCCAAGGAGAGAAGCAGTTCCGAACAGAAGTTAGTACAATAGGGACAATACAACATGTTAATCTCGTTCGGCTTCGTGGATTCTGCTCCGAAGGTGCCCAAAAGCTTCTGGTTTATGATTACATGCCAAATCGCTCCTTGGAATTCCATCTATTCCAGAACAAGAACTCTGGGGTGTTGGAATGGAAAATGAGATACCAAATTGCTCTTGGAGTAGCAAGGGGATTAACTTACCTCCATGAGAAGTGCAGAGACTGTATTATACACTGCGATGTAAAGCCAGAAAACATTCTCTTAGATGCTGAGTATTGTCCAAAAGTTGCAGACTTTGGGCTTGCAAAGCTAATTGGGAGGGATTTCAGCAGGGTCCTCACAACCATGAGAGGAACAAGAGGTTATCTTGCACCAGAGTGGATTTCTGGGGTGGCTATCACAGCTAAAGCTGATGTCTACAGCTATGGAATGATGCTTTTTGAGTTTGTGTCAGGTAGGAGAAACTCTGAGCCTTCAGAAGATGGCAAAGTTACGTTTTTTCCTACCTGCGCTGCAAACCTTGTTATCCAAGGTGGCAGTGTCCTTAGCCTTTTGGACCCTTTGTTGCAGGGAAATGCTGATATTGAAGAGGTCACTAGAATAATTAAAGTTGCTTCTTGGTGTGTCCAAGACAATGAAACTCACCGGCCAACCATGGGTCAGGTAGTTCAAATTCTTGAGGGGATCTTGGAGGTGACTTTGCCTCCAATTCCAAGATCCCTTCAAGTGTTTGGTGACAATCAGGAGAACTTAGTTTTCTTCACAGACTCAAGCTCAACCCAGAGTTCACAGGTAAAGAGCAACGTCTCAACAATCTCCTCCCAAGCCAAAAGCAACATCTCATCAGCAAGCTCCAAGTCCTCAGGAGGAAATTAG 2253 0.4319 MLSGGAAICNMRKTWLWFSLLTLFFSFHTYPSLAAPLTTISANQSLSGDQTLLSQGGIFELGFFKPDFLWQSFDHPTDTWLPGGKIKLDNKTKKPQYLTSWKNNQDPATGLFSLELDPKGTTSYLILWNKSEEYWTSGPWNGHIFSLVPEMRANYIYNFTFVTNENESYFTYSMYNSSIISRFVMDISGQIKQLSWLDNTQQWNLFWSQPRRQCEVYAFCGAFGSCTEYSMPFCNCLTGFQPKSQSDWDLGDHSGGCKRKTNLQCGNSNPSNRDKDRFLAIPNMALPKHAQSVGSGNVGECESTCLNNCSCIAYAYGSNGCSIWNGDLLNLQQLSSDDSRGETMYLKLAASEFHDAKKSNGKIIGVVVGAVVGIGVVLALLLFVMIRRRRMVGTGKPVEGSLVAFGYRDLQNATKNFSDKLGGGGFGSVFKGMLGDSSIIAVKKLESISQGEKQFRTEVSTIGTIQHVNLVRLRGFCSEGAQKLLVYDYMPNRSLEFHLFQNKNSGVLEWKMRYQIALGVARGLTYLHEKCRDCIIHCDVKPENILLDAEYCPKVADFGLAKLIGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGKVTFFPTCAANLVIQGGSVLSLLDPLLQGNADIEEVTRIIKVASWCVQDNETHRPTMGQVVQILEGILEVTLPPIPRSLQVFGDNQENLVFFTDSSSTQSSQVKSNVSTISSQAKSNISSASSKSSGGN 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi251g00014 750 Pfam Protein kinase domain 418 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi251g00014 750 Pfam PAN-like domain 273 330 IPR003609 -
Gabi251g00014 750 ProSiteProfiles Protein kinase domain profile. 415 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi251g00014 750 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Gabi251g00014 750 PIRSF SRK 65 737 IPR024171 GO:0004674
Gabi251g00014 750 PIRSF SRK 9 68 IPR024171 GO:0004674
Gabi251g00014 750 Gene3D Transferase(Phosphotransferase) domain 1 490 693 - -
Gabi251g00014 750 Pfam S-locus glycoprotein domain 135 244 IPR000858 GO:0048544
Gabi251g00014 750 FunFam Serine/threonine-protein kinase 490 693 - -
Gabi251g00014 750 MobiDBLite consensus disorder prediction 719 750 - -
Gabi251g00014 750 Pfam D-mannose binding lectin 66 102 IPR001480 -
Gabi251g00014 750 SUPERFAMILY alpha-D-mannose-specific plant lectins 52 107 IPR036426 -
Gabi251g00014 750 CDD PAN_AP_plant 261 349 - -
Gabi251g00014 750 SUPERFAMILY Protein kinase-like (PK-like) 401 718 IPR011009 -
Gabi251g00014 750 FunFam Serine/threonine-protein kinase 382 489 - -
Gabi251g00014 750 SMART serkin_6 415 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi251g00014 750 ProSiteProfiles PAN/Apple domain profile. 265 349 IPR003609 -
Gabi251g00014 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Gabi251g00014 750 SUPERFAMILY Hairpin loop containing domain-like 275 332 - -
Gabi251g00014 750 CDD STKc_IRAK 421 688 - -
Gabi251g00014 750 Gene3D Phosphorylase Kinase; domain 1 384 489 - -
Gabi251g00014 750 PANTHER OS07G0415500 PROTEIN 41 697 - -
Gabi251g00014 750 SMART ntp_6 273 348 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi251g00014 Gabi-Chr251 100222 102929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi251g00014 372 695 Receptor kinase-like Gene Family AT5G20050 41.389 3.67e-78 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gabi251g00014 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi251g00014 - - gmx:100810583 1196.03