Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi251g00008 ATGAAGAACTGCGAGCTGTGCAAGGTTCCGGCGAGGACCTTCTGCGAGTCTGACCAGGCAAGCTTGTGCTGGGACTGCGATGCTAAGGTTCACGGTGCCAACTTCTTGGTTGCAAGGCACTCCAGGACCCTTCTATGTCGCTCGTGTCAGTCTCTCACGCCGTGGAAGGCTTCCGGCGCCGCCCTTGGAAACACCGTCTCCTTGTGCGAGAGGTGTGCGGGCGGAACCAAGATCGACGACCCCCAACAAGGGGAAGAGAGCGAAGGAGGCAATGACGACTATATAGACACTGACAACGACGACGACGACGACGACGACATAGACACTGACGATGACGACCAGGACGAGGACGAGGACGGAGATAACCAGGTTGTCCCTTGGTCTTCGACGGCGCCGCCACCGGCTTCGAGTTCATCGAGCAGCGAAGAGTCGGTTAGCACGTGCAACAACCGCGATGAGGAGGTTTCTCAGCCAGGGACCACAATTTCGTTGAAGCGACGTCGTTTAGATCATGATTTTCAGGAGGGTTTGAACAGTTGTGCATATCAACGGAGGCACGGTGCGAGGTGGAGAGGTGAGGTTGCGTTGGTAGGGTACGACGGAGAGCCGCCGTCGAAGGCGTCGAGGCGGTCTTTGAGCGACGGATAA 648 0.5756 MKNCELCKVPARTFCESDQASLCWDCDAKVHGANFLVARHSRTLLCRSCQSLTPWKASGAALGNTVSLCERCAGGTKIDDPQQGEESEGGNDDYIDTDNDDDDDDDIDTDDDDQDEDEDGDNQVVPWSSTAPPPASSSSSSEESVSTCNNRDEEVSQPGTTISLKRRRLDHDFQEGLNSCAYQRRHGARWRGEVALVGYDGEPPSKASRRSLSDG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi251g00008 215 MobiDBLite consensus disorder prediction 85 122 - -
Gabi251g00008 215 SMART bboxneu5 1 45 IPR000315 GO:0008270
Gabi251g00008 215 CDD Bbox1_BBX-like 4 45 - -
Gabi251g00008 215 MobiDBLite consensus disorder prediction 123 163 - -
Gabi251g00008 215 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 177 - -
Gabi251g00008 215 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Gabi251g00008 215 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Gabi251g00008 215 MobiDBLite consensus disorder prediction 76 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi251g00008 Gabi-Chr251 60559 61883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi251g00008 2 134 C2C2-CO-like Transcription Factor Family AT4G27310 38.824 2.85e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi251g00008 zf-B_box 2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi251g00008 - - mtr:11417549 204.527