Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi251g00007 ATGGAAGTTACTAATGTTTTGTCATCAAGTAGCTTCACTAAGAGCATGAGAACCATTGTCATCATCTTCCTCCTTTATGTGTGGCTGCTATGTTTTTTCCAACCATGTATTGCAACGGATGTTTTGAAAGTTGGCGACAAGATAACTGGAGATCAAAGGATTGTTTCAGCTGGAAAAAAATTTGTTCTAGGCTTTTTTTCTCCACAGAAAAGCACCAATGGTCTAGAATGTTACATAGGGATATGGTATAACCAATCAGAAAACTTAAACCCGGAAACAGTGGTGTGGGTTGGCAACAGAGACAACCCTGTAGATTCTAGTGGAATTTTTCAAATCGCAAATGATGGGAATCTAGTAGTAAAAGATTCATCTGGACAAATCTATTGGTCCTCTAAACTTGAAGGCTCCTCATCTAGAAACAAGACAATGAAGCTCATGGATTCTGGGAACTTGGTGTTACTAGATGACTTGGGAACGAGTTACCTCTGGCAAAGTTTCCGACACCCAACAGACACATTTCTTCCGGGCATGAAAATGGATGCAAATTTGACGTTGACTTCTTGGAGAAGCGCCGATGACCCTAGAAGTGGGAGCTTCACATTTAAGCTGCCTATAACTGGGGACACTCGAAACTTCATGGTATACAACCAGTCACAACTTTACTGGGCACATGATGGACTCGATTCAGAAGACATGTCCCCAGTAATTAACTTTTTGGATAACTTTACCTTAAACGTTTCGTCGTTCAAGTATCTTAACCAAACGATGTCCTTGAAACAGTATGACTATGGGGTTTCAAGGCTGTTAATGAATTATACAGGGGAGTTTCAGTTTCTGAAGTTGGACAACTTAAAATGGTCAAATATATGCGGGAGACCAGCTGACAAGTGTGACATACATAACTATTGCGGGAGCTTTAGTAGCTGCAACAAAAATAATTGGATTACCTGCAAATGTTTGCCCGGATTCAGTCCAATTTCGAAGGATAATCAGCACCTGGGAGAGCGATTCCAAGGGTGTGTCAGAACATCAACATCATGTACCAACATGAAGTTCCTGACCTTAAAGATGATAAAAGTGGGCAACCCAGACAAAAGATTCTCAACAGTATCAGAAGCAGAATGCAAATCTTTATGCCTTAATAGGTGTCTCAACTCCCAGTGTCAGGCTTATTCATACAATTTGTCTTCTTCATACAATCGTAGTCCCTTAACATGCGGGATTTGGACACGGGATTTACCAACTCTTCAAGAAGAGCAGCATGATGAAGAGCGTGATCTTTCTATCCTGGTCAAGAGTTCAGATATTGCATCAACTCCAAGATCGTGTGAACCTTGCGGCACATATATGATTCCTTATCCCCTAAGCACTGGGCCAAACTGTGGAGACCCCATGTACAACAAGTTCAATTGCGATAACTCAACAGGCCAGGTTAGCTTCATGATGCCGGGAGAAAAATCATACCAAGTTACTTGGATCGATGAACATGCTAGAAGGTTTTCCATCCAAACGAATGATTCATATCACTGTGATTCCATTTCCGGCTATCAAAACGACAAGGTTAATGCTCCATTTAATGTGACTGATTGGTGCTTTAAGGATGATCAAATAGAGATCAGTTGGCTACCAGCACCAGAACCTGCCTGTAGTGAGTATAAAGACTGCAAGAATTGGCTCCATTCAACATGCAACGCAACAAGTGAAGGGCAAAGAAGGTGCCTTTGTGATTCTAACTATCAGTGGAATGCCTCAAATTTAAGCTGTACCCAAGAAGATCCATCAAGAAGCCCTTCAACCAACCGACTGCCATTGATTCTTTCACTAATTCTTGCATGCATGGTTATTCTGGCATGCACTATAGTATTTGCTTATGTGCGGAGAAAGAAAATAGCCCAAAAGCTTGATGGTGTAAGCACTCGAATTCAGGAGAGCTTGTACGATAGTGAAAGACATGTGAAGCATTTGATTGGCTTGGGAAGTTTAGAAGAAAAAGACAGTGAAGGCATTGAAGTACCGTATTATACTTTTCGAAGTATTCTAGCAGCTACAGATAATTTCTCGGATTCAAACAAGCTTGGACAAGGAGGTTATGGGCCTGTCTATAAGGGAAGGTTTCCTAGAGGTCATGACGCCGCTGTGAAGAGACTTTCAAGTGTTTCGGCTCAAGGCTTACAAGAATTCAAAAATGAGGTTGTTTTGATTGCCAAACTTCAACATAGGAACCTTGTTAGACTCAGGGGATACAGCATCAAAGGAGACGAAAAAATCTTAGTCTATGAATACATGCCAAACAAGAGCTTGGACTCATTTATATTTGACCGGACACGAACTTTACTTCTGGATTGGCACATGCGATTTGACATAATTCTAGGCATTGCACGAGGGTTGCTCTATCTTCACCAAGACTCCAGGTTGAGAGTGATTCATAGAGACCTAAAATCAAGCAACATTCTTTTAGATGAGGAGATGAATCCAAAGATTTCAGACTTTGGCCTTGCCAAAATATTTGGGGGAAAAGAGACCGAAGCAAGCACACAGAGAGTAGTGGGAACCTAA 2556 0.4131 MEVTNVLSSSSFTKSMRTIVIIFLLYVWLLCFFQPCIATDVLKVGDKITGDQRIVSAGKKFVLGFFSPQKSTNGLECYIGIWYNQSENLNPETVVWVGNRDNPVDSSGIFQIANDGNLVVKDSSGQIYWSSKLEGSSSRNKTMKLMDSGNLVLLDDLGTSYLWQSFRHPTDTFLPGMKMDANLTLTSWRSADDPRSGSFTFKLPITGDTRNFMVYNQSQLYWAHDGLDSEDMSPVINFLDNFTLNVSSFKYLNQTMSLKQYDYGVSRLLMNYTGEFQFLKLDNLKWSNICGRPADKCDIHNYCGSFSSCNKNNWITCKCLPGFSPISKDNQHLGERFQGCVRTSTSCTNMKFLTLKMIKVGNPDKRFSTVSEAECKSLCLNRCLNSQCQAYSYNLSSSYNRSPLTCGIWTRDLPTLQEEQHDEERDLSILVKSSDIASTPRSCEPCGTYMIPYPLSTGPNCGDPMYNKFNCDNSTGQVSFMMPGEKSYQVTWIDEHARRFSIQTNDSYHCDSISGYQNDKVNAPFNVTDWCFKDDQIEISWLPAPEPACSEYKDCKNWLHSTCNATSEGQRRCLCDSNYQWNASNLSCTQEDPSRSPSTNRLPLILSLILACMVILACTIVFAYVRRKKIAQKLDGVSTRIQESLYDSERHVKHLIGLGSLEEKDSEGIEVPYYTFRSILAATDNFSDSNKLGQGGYGPVYKGRFPRGHDAAVKRLSSVSAQGLQEFKNEVVLIAKLQHRNLVRLRGYSIKGDEKILVYEYMPNKSLDSFIFDRTRTLLLDWHMRFDIILGIARGLLYLHQDSRLRVIHRDLKSSNILLDEEMNPKISDFGLAKIFGGKETEASTQRVVGT 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi251g00007 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 651 761 - -
Gabi251g00007 851 SUPERFAMILY Protein kinase-like (PK-like) 669 851 IPR011009 -
Gabi251g00007 851 Gene3D Phosphorylase Kinase; domain 1 658 761 - -
Gabi251g00007 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 762 851 - -
Gabi251g00007 851 ProSiteProfiles PAN/Apple domain profile. 347 434 IPR003609 -
Gabi251g00007 851 SMART serkin_6 686 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi251g00007 851 ProSiteProfiles Protein kinase domain profile. 686 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi251g00007 851 Pfam S-locus glycoprotein domain 233 325 IPR000858 GO:0048544
Gabi251g00007 851 FunFam Receptor-like serine/threonine-protein kinase SD1-8 34 166 - -
Gabi251g00007 851 SMART ntp_6 347 431 IPR003609 -
Gabi251g00007 851 Pfam D-mannose binding lectin 93 184 IPR001480 -
Gabi251g00007 851 Pfam Protein kinase domain 687 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi251g00007 851 PIRSF SRK 544 851 IPR024171 GO:0004674
Gabi251g00007 851 PIRSF SRK 466 594 IPR024171 GO:0004674
Gabi251g00007 851 PIRSF SRK 11 452 IPR024171 GO:0004674
Gabi251g00007 851 SMART blect_4 45 169 IPR001480 -
Gabi251g00007 851 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 845 - -
Gabi251g00007 851 Gene3D Transferase(Phosphotransferase) domain 1 762 851 - -
Gabi251g00007 851 CDD B_lectin 48 169 IPR001480 -
Gabi251g00007 851 Gene3D - 36 168 IPR036426 -
Gabi251g00007 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Gabi251g00007 851 ProSiteProfiles Bulb-type lectin domain profile. 39 166 IPR001480 -
Gabi251g00007 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 194 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi251g00007 Gabi-Chr251 44216 48421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi251g00007 676 851 Receptor kinase-like Gene Family AT4G23230 66.477 8.44e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi251g00007 Pkinase 4.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi251g00007 - - vvo:131653723 1009.59