Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2519g00034 ATGGGGCCTTCAGGTTCAGGGAAGACAACATTGCTTAATGTTCTTGCGGGTCAGCTGGCAGCATCGCCCCGGCTACATTTAACTGGCCTTTTGGAATTCAATGGAAAGCCTAGTACCAACAACACCTACAAGTTTGCTTATGTGAGACAGGAGGATCTATTTTTCTCACAGCTCACTGTGCGGGAAACATTGTCTCTTGCTACAGAACTCCAGCTTCCCAACATATCTTCCGCAGAAGAAAGAGATGACTACGTGAACAATCTCCTTTTCAAACTTGGCTTGGTCAGTTGTGCTGATACCAATGTTGGTGATTCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTATCTATGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAAAAACTTGCACAAGATGGTCATACTGTGATTTGCTCTATACACCAGCCACGAGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTGCTAACTGAGGGTTCACTTGTATATGCTGGTCCTGCTCATGATGAACCATTGGCATACTTCTCAAAATTCGGGTACCACTGCCCAGATCACGTAAATCCTGCTGAATTTTTGGCTGATCTCATATCCGTAGACTACAGTTCTGCAGATAGTGTCTATTCCTCTAAAAAAAGGATTGATGGTCTTGTTGAGTCATTTTCACACAGACTATCTACAGTAATATATGCAACTCCAATTACTATAGATGATCTCTCAAAAGGTAGAACGAAAGTCAGCAAGAGGACTGTAGCAAAGAAGAAAGGAGGTTGGTGGAAGCAATTTTGGTTGCTCCTTAGACGAGCATGGATGCAGGCTTCTCGTGATGCACCAACAAACAAAGTTCGGGCAAGGATGTCAATTGCATCAGCAATTATCTTTGGGTCAGTTTTTTGGAGAATGGGAATATCTCAGACGTCAATACAAGACAGAATGGGATTGCTTCAGGTTACTGCAATAAACACAGCTATGGCTGCTCTCACAAAGACTGTAGGTGTGTTTCCAAAGGAACGGGCAATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGTCCCTATCTGTTTTCGAAATTGTTGGCTGAGATTCCCATTGGAGCTGCATTTCCATTAATGTTTGGTGCTGTTTTGTACCCCATGGCACGTCTTCATCCTACTTTACTGAGATTTGGGAAATTCTGTGGAATTGTCACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGGGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTTATGACTGTTTTTATCGTATTTGGAGGCTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGGGCCTTTCAGGGACTTTGCATCAATGAATTTAGTGGCCTTCAATTTGAACATCAGCATTCATTTGATGTTCAAACTGGAGAACAGGCATTAGAACGTATTTCCTTTGGAAAAAGTAGGATTATGGATACGGTGGTAGCGCAAAATAGAATACTGTTATTTTGGTATTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCCAAATACCAGCAACTTGAAACAACCCCTCTTGACCATGACAAACCACATTTGAAAATTGAGGAGTTCAATTCTAAACAAGTTGATCAGACACTTGATGCTCCACCGGTCAACCAAGTTGGTTCCAACCAGCCTCAGGAATCACCTGAAGTAGATCCTGTTGGCCCTTTTATGCTAGAAGAGAGATATCTTTGCAAAGGATGA 1863 0.4294 MGPSGSGKTTLLNVLAGQLAASPRLHLTGLLEFNGKPSTNNTYKFAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEERDDYVNNLLFKLGLVSCADTNVGDSKVRGISGGEKKRLSMACELLASPSVIFADEPTTGLDAFQAEKVMETLQKLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPAHDEPLAYFSKFGYHCPDHVNPAEFLADLISVDYSSADSVYSSKKRIDGLVESFSHRLSTVIYATPITIDDLSKGRTKVSKRTVAKKKGGWWKQFWLLLRRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGISQTSIQDRMGLLQVTAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGAAFPLMFGAVLYPMARLHPTLLRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFSGLQFEHQHSFDVQTGEQALERISFGKSRIMDTVVAQNRILLFWYCTTYLLLEKNKPKYQQLETTPLDHDKPHLKIEEFNSKQVDQTLDAPPVNQVGSNQPQESPEVDPVGPFMLEERYLCKG 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2519g00034 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 196 IPR027417 -
Gabi2519g00034 620 SMART AAA_5 1 187 IPR003593 GO:0016887
Gabi2519g00034 620 MobiDBLite consensus disorder prediction 585 607 - -
Gabi2519g00034 620 MobiDBLite consensus disorder prediction 585 602 - -
Gabi2519g00034 620 CDD ABCG_EPDR 1 192 - -
Gabi2519g00034 620 ProSitePatterns ABC transporters family signature. 110 124 IPR017871 GO:0005524|GO:0016887
Gabi2519g00034 620 FunFam ABC transporter G family member 7 1 200 - -
Gabi2519g00034 620 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 516 - -
Gabi2519g00034 620 Pfam ABC-2 type transporter 287 497 IPR013525 GO:0016020|GO:0140359
Gabi2519g00034 620 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 210 IPR003439 GO:0005524
Gabi2519g00034 620 Pfam ABC transporter 1 137 IPR003439 GO:0005524
Gabi2519g00034 620 Gene3D - 1 200 IPR027417 -
Gabi2519g00034 620 Pfam ABC-2 type transporter 167 224 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2519g00034 Gabi-Chr2519 335865 349176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2519g00034 1 275 Calmodulin-binding Proteins AT2G36910 26.523 2.02e-10 62.4