Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2519g00033 ATGGTGGTTTTTGGCGGGAAAAAGGCGCGCCAAATGGTCGCCGGCTTCGGCGGCAGTGGCCTCGGTCAGGTCGTCGTCGCCGTCGCTGTCTCCCTCCTCGTCCGCATCTTCTCCGCTCCCGGCCCCGCCCTCTCGCCGGAAAACGATTACGACGATGTGCCGGACAACGATTCCCACGGCGGTGAAGCTCTTCCCTCCGGAAAGGTCACGCCGGTCACAATCCGCTGGAACAACATCAATTGCTCCCTTTCTGATAAATCCTCCAAGTTCGTGAGGTTTTTGCTTAAAAATGTGAGCGGAGAAGCAAAGCCTGGAAGATTATTGGCTATAATGGGGCCTTCAGGTTCAGGGAAGACAACATTGCTTAATGTTCTTGCGGGTCAGCTGGCAGCATCGCCCCGGCTACATTTAACTGGCCTTTTGGAATTCAATGGAAAGCCTAGTACCAACAACACCTACAAGTTTGCTTATGTGAGACAGGAGGATCTATTTTTCTCACAGCTCACTGTGCGGGAAACATTGTCTCTTGCTACAGAACTCCAGCTTCCCAACATATCTTCCGCAGAAGAAAGAGATGACTACGTGAACAATCTCCTTTTCAAACTTGGCTTGGTCAGTTGTGCTGATACCAATGTTGGTGATTCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTATCTATGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAAAAACTTGCACAAGATGGTCATACTGTGATTTGCTCTATACACCAGCCACGAGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTGCTAACTGAGGGTTCACTTGTATATGCTGGTCCTGCTCATGATGAACCATTGGCATACTTCTCAAAATTCGGGTACCACTGCCCAGATCACGTAAATCCTGCTGAATTTTTGGCTGATCTCATATCCGTAGACTACAGTTCTGCAGATAGTGTCTATTCCTCTAAAAAAAGGATTGATGGTCTTGTTGAGTCATTTTCACACAGACTATCTACAGTAATATATGCAACTCCAATTACTATAGATGATCTCTCAAAAGGTAGAACGAAAGTCAGCAAGAGGACTGTAGCAAAGAAGAAAGGAGGTTGGTGGAAGCAATTTTGGTTGCTCCTTAGACGAGCATGGATGCAGGCTTCTCGTGATGCACCAACAAACAAAGTTCGGGCAAGGATGTCAATTGCATCAGCAATTATCTTTGGGTCAGTTTTTTGGAGAATGGGAATATCTCAGACGTCAATACAAGACAGAATGGGATTGCTTCAGGTTACTGCAATAAACACAGCTATGGCTGCTCTCACAAAGACTGTAGGTGTGTTTCCAAAGGAACGGGCAATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGTCCCTATCTGTTTTCGAAATTGTTGGCTGAGATTCCCATTGGAGCTGCATTTCCATTAATGTTTGGTGCTGTTTTGTACCCCATGGCACGTCTTCATCCTACTTTACTGAGATTTGGGAAATTCTGTGGAATTGTCACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGGGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTTATGACTGTTTTTATCGTATTTGGAGGCTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGGGCCTTTCAGGGACTTTGCATCAATGAATTTAGTGGCCTTCAATTTGAACATCAGCATTCATTTGATGTTCAAACTGGAGAACAGGCATTAGAACGTATTTCCTTTGGAAAAAGTAGGATTATGGATACGGTGGTAGCGCAAAATAGAATACTGTTATTTTGGTATTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCCAAATACCAGCAACTTGAAACAACCCCTCTTGACCATGACAAACCACATTTGAAAATTGAGGAGTTCAATTCTAAACAAGTTGATCAGACACTTGATGCTCCACCGGTCAACCAAGTTGGTTCCAACCAGCCTCAGGAATCACCTGAAGTAGATCCTGTTGGCCCTTTTATGCTAGAAGAGAGATATCTTTGCAAAGGATGA 2193 0.4505 MVVFGGKKARQMVAGFGGSGLGQVVVAVAVSLLVRIFSAPGPALSPENDYDDVPDNDSHGGEALPSGKVTPVTIRWNNINCSLSDKSSKFVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLTGLLEFNGKPSTNNTYKFAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEERDDYVNNLLFKLGLVSCADTNVGDSKVRGISGGEKKRLSMACELLASPSVIFADEPTTGLDAFQAEKVMETLQKLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPAHDEPLAYFSKFGYHCPDHVNPAEFLADLISVDYSSADSVYSSKKRIDGLVESFSHRLSTVIYATPITIDDLSKGRTKVSKRTVAKKKGGWWKQFWLLLRRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGISQTSIQDRMGLLQVTAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGAAFPLMFGAVLYPMARLHPTLLRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFSGLQFEHQHSFDVQTGEQALERISFGKSRIMDTVVAQNRILLFWYCTTYLLLEKNKPKYQQLETTPLDHDKPHLKIEEFNSKQVDQTLDAPPVNQVGSNQPQESPEVDPVGPFMLEERYLCKG 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2519g00033 730 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Gabi2519g00033 730 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 320 IPR003439 GO:0005524
Gabi2519g00033 730 MobiDBLite consensus disorder prediction 45 64 - -
Gabi2519g00033 730 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 66 626 - -
Gabi2519g00033 730 MobiDBLite consensus disorder prediction 695 717 - -
Gabi2519g00033 730 Gene3D - 68 310 IPR027417 -
Gabi2519g00033 730 MobiDBLite consensus disorder prediction 695 712 - -
Gabi2519g00033 730 CDD ABCG_EPDR 71 302 - -
Gabi2519g00033 730 SMART AAA_5 104 297 IPR003593 GO:0016887
Gabi2519g00033 730 Pfam ABC-2 type transporter 397 607 IPR013525 GO:0016020|GO:0140359
Gabi2519g00033 730 Pfam ABC transporter 95 247 IPR003439 GO:0005524
Gabi2519g00033 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 306 IPR027417 -
Gabi2519g00033 730 FunFam ABC transporter G family member 7 72 310 - -
Gabi2519g00033 730 Pfam ABC-2 type transporter 277 334 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2519g00033 Gabi-Chr2519 335864 349375 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2519g00033 94 385 Calmodulin-binding Proteins AT2G36910 26.351 2.63e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2519g00033 K05681 - gmx:100788256 1257.28