Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2516g00001 ATGGCAACAAAAGCTGAGATTGTATCTAAGGACACCATTAAGCCATTCTCTCCAACCCCTAATCATCTTAGAGACTTCAAAATCTCCCTCCTTGATCAATTGGCTCCTTCCTCAAATTATGTTCCTGTTGTCCTATTTTACACTGCCTCTGATGTTAGTGTTCTCGGGAATGATATCAAAATGATATCTGACAAGTTAAAGTCTTCTTTATCGAATGTCCTCACTCTTTATTACCCATTTTGTGGAATATTGAAAGACAATTCAACTGTTGAGTGCAATGATGAAGGTGTTCTCTACATCGAGTCTAAAGTCCCCAAAGAACTCTCAAATATTCTGAAAAATCCTCAAGCTCATGAGATCAATGAACTTTTCCCATTTGATCTCTACAACCCTGAAGTAGATCACAAGAAACCTATACGGAACATGGCAGTTCAATTGAATGAATTCAGCTGCGGGGGTATAGGACTTGGTGTGTGCTTCTCACACAAGATTGCTGATGCTTCAACAATGTCATCGTTCCTCAATGCATGGAGTGCAAAAGCAAGGGGAGATAGCAACATAGTGGCACCTCAAATGGAAGCAGCCTTGCTTTTCCCACCCATGAACATAGAAATAGACATAACACGTGGGGTGGCTGGTCACAAAAACATTGTAACGAAGAGGTTCATATTTAATGGGAAAAACATATCGAAACTAAGGGACAAACTTGGTTGCCTCAAACCCACTCGTGTTGAAGCTGTGACAGCACTCATATGGAAATCAGCTATTGAAGCAGCAAAAGCAAGCTCAGGGGAAAAGACACGTCATGCATGTATGGTATCCCATGCGGTGAACATTTGCAGTCGAATGGACTCATCATTGTTGAGGCAAATGTTAGGAAATCTTTGGGTACTGGCTGTGTCTCCATTGGTGGAAGTGGAAGAAGTGGTAGGGTTGGATGATTTGGCAGAGATAGTTAGAAAAACGGTAAAAAAAGTTGATGCAGATTATGTAAAAATGCTTCAGGGTGATGAGTTGCCTATGGTTCTTGAAGCTTTTGAGGAATCAAGGAAAATGGTCACAGAAAAAGGTATTCCATGTTATAGCTTTAGCAGTTGGACCAGATTTGATTTATATAATGTTGATTTTGGATGGGGAAAGCCAACTTGGGTGTGTACTATCGGTTTGCCTATACAAAATGTGGTCATTTTTCTGGCAACAAAAAATGGGGATGGAATAGAGGCATGGATCACTTTGACTGAGCATGATATGGTCGAGTTTGAGCGCAATCCACAACTTCTTGAGTTTGCATCATTCGATTTTTAG 1305 0.4061 MATKAEIVSKDTIKPFSPTPNHLRDFKISLLDQLAPSSNYVPVVLFYTASDVSVLGNDIKMISDKLKSSLSNVLTLYYPFCGILKDNSTVECNDEGVLYIESKVPKELSNILKNPQAHEINELFPFDLYNPEVDHKKPIRNMAVQLNEFSCGGIGLGVCFSHKIADASTMSSFLNAWSAKARGDSNIVAPQMEAALLFPPMNIEIDITRGVAGHKNIVTKRFIFNGKNISKLRDKLGCLKPTRVEAVTALIWKSAIEAAKASSGEKTRHACMVSHAVNICSRMDSSLLRQMLGNLWVLAVSPLVEVEEVVGLDDLAEIVRKTVKKVDADYVKMLQGDELPMVLEAFEESRKMVTEKGIPCYSFSSWTRFDLYNVDFGWGKPTWVCTIGLPIQNVVIFLATKNGDGIEAWITLTEHDMVEFERNPQLLEFASFDF 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2516g00001 434 PANTHER F21J9.9 6 431 - -
Gabi2516g00001 434 Gene3D - 214 428 IPR023213 -
Gabi2516g00001 434 Pfam Transferase family 4 425 - -
Gabi2516g00001 434 Gene3D - 1 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2516g00001 Gabi-Chr2516 22500 23804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2516g00001 40 422 Monolignol Biosynthesis Gene Families AT5G48930 24.879 1.19e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2516g00001 - K13065 gmx:100792323 543.502