Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2514g00002 ATGGCCTTCATCAATGATGCAGATAGAAAGGCAGAAGTTGAAGATGATAAAACACAGGAAGGAATCAAAACAGCGGTTAAGTTGGTGAGAGAAGCAGTTTTTCGCATAGAAGATGTCATTGATGAATATACTTCCTGTGGGGAACAACAGCCTTCTGATCCTGGTTGTGTAGTCTTACCATGTGAGCCTGCTGTCTTCATCCAAACTATGACCCTTCGTCTTCAAATAGCATTTAAGATTAAGGGTATTAAATTACAAGTTCGTGAAATCAAGGAAAGAAGTGAAAGAGATGGCTTCCTAATCCAATCTTCTTTGGAACAGGCACCAGCCACTTCTAGCAGAAACCGAGACGTCACATTGCATAACCTTCAAATGCTTCCTTTTTACACTGAGGAAGCTGATGTTGTGGGCTTTGAAGTCCCTAAAGCTGAATTGATTGGTTGGTTGGTAAAGGGAAGAGCGAAGCGCACTGTCATCTCTTTGATAGGAATGGGAGGGCAAGGGAAAACTACTCTTGCCAAGAAAGTTTTTGATAACAAAGAAGTGATTGGGTACTTCAATTGCCATGCATGGGTCACAGTATCTCAGTCGTACACCGTGGATGGATTGTTGAGGGACATGTTGCAACAATTTTGCAAAGAAAAGAAGGAGGTTCCTCCTGCTGATATTGCTACAATGAATCGAGACTCATTGATAAAGGAAGTAAGAAGCTACTTGCAGCAAAAGAGATACGTTGTCCTCTTTGATGATGTATGGAATGAACATTTCTGGGATGAAATTGAATTTGCTTTAATTGATGATGAAAACGGAAGCAGGATATTTATCACAACTAGAGACATGCGTGTTGCAAGTTGTAGTAAAAAAACTTCTTTTGTTGAAGTGCATGAGCTACAACCATTAACTCATGAGAAATCCTTTGAGTTGTTCTGTAGGAAGGCATTCAGATATGATTTGAACGGATGTTGTCCACAAAACCTTATGGGTATATCTTCCGAAATTGTTAAAAAATGTGAGGGTTTGCCACTAGCAATTGTGGCCATTGGTGGCCTTTTATCTACCAAAGGTAGAGATGCATTTGAATGGGAATTTTTTAGTCAAAATCTAAGTTTAGAATTGCATAAGAATTCCCATTTAGATGCTATAACAAAGATTTTAGCTTTTAGTTATCATGATTTGCCTTACTATCTCAAAGAATGTTTCTTGTATTTTGGAATATATCCAGAAGACCATGAAGTTAAATCAAAAAGATTGATTCGGCAATGGGTAGCTGAGGGATTTATCAAACAAGAAGGGAGAAAAACTTTGGAAGAAGTTGCAAAAGAATATTTAACAGAGTTGGTTAATAGAAGTTTGGTGCAAGTCTCTTCATTAACCATGGATGGTAAAATTAGGAGTTGTCGCATTCATGACCTATTGCGCGACATGATCCTTAGAAAGTGTAAGGATTTAAGTTTTTGTCACTTTATTAGTGAAGATGGTGAGTCTGACTTAAGTGGGATAGTTAGGCGTCTATCAATATCAAGCAGAGCTGATAGTTTAATGAGAAGTATTGAAAGCTCAGACGTTCGATCCTTGTTTGTTTTTATACGTGAAGATTTATCTGAAGACTTTGTGAAGATTCTCTTTACGAATTCCAAGCCATTGAAGGTACTTGATTTTGAAGATGCGGGAGTCTATCATGAAGATGCAACAATTGATCGTATTGTTAAGAATTTGGGGGATTAA 1725 0.3786 MAFINDADRKAEVEDDKTQEGIKTAVKLVREAVFRIEDVIDEYTSCGEQQPSDPGCVVLPCEPAVFIQTMTLRLQIAFKIKGIKLQVREIKERSERDGFLIQSSLEQAPATSSRNRDVTLHNLQMLPFYTEEADVVGFEVPKAELIGWLVKGRAKRTVISLIGMGGQGKTTLAKKVFDNKEVIGYFNCHAWVTVSQSYTVDGLLRDMLQQFCKEKKEVPPADIATMNRDSLIKEVRSYLQQKRYVVLFDDVWNEHFWDEIEFALIDDENGSRIFITTRDMRVASCSKKTSFVEVHELQPLTHEKSFELFCRKAFRYDLNGCCPQNLMGISSEIVKKCEGLPLAIVAIGGLLSTKGRDAFEWEFFSQNLSLELHKNSHLDAITKILAFSYHDLPYYLKECFLYFGIYPEDHEVKSKRLIRQWVAEGFIKQEGRKTLEEVAKEYLTELVNRSLVQVSSLTMDGKIRSCRIHDLLRDMILRKCKDLSFCHFISEDGESDLSGIVRRLSISSRADSLMRSIESSDVRSLFVFIREDLSEDFVKILFTNSKPLKVLDFEDAGVYHEDATIDRIVKNLGD 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2514g00002 574 Gene3D - 122 294 IPR027417 -
Gabi2514g00002 574 PRINTS Disease resistance protein signature 158 173 - -
Gabi2514g00002 574 PRINTS Disease resistance protein signature 238 252 - -
Gabi2514g00002 574 PRINTS Disease resistance protein signature 337 351 - -
Gabi2514g00002 574 Pfam NB-ARC domain 142 390 IPR002182 GO:0043531
Gabi2514g00002 574 Gene3D - 1 77 - -
Gabi2514g00002 574 CDD RX-CC_like 2 92 IPR038005 -
Gabi2514g00002 574 Gene3D - 389 480 IPR036388 -
Gabi2514g00002 574 Gene3D - 299 388 IPR042197 -
Gabi2514g00002 574 FunFam Probable disease resistance protein At1g63360 389 478 - -
Gabi2514g00002 574 FunFam Probable disease resistance protein At1g61300 121 290 - -
Gabi2514g00002 574 PANTHER DISEASE RESISTANCE PROTEIN RP 24 554 IPR044974 GO:0006952
Gabi2514g00002 574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 403 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2514g00002 Gabi-Chr2514 26932 28980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2514g00002 159 356 WRKY Transcription Factor Family AT5G45050 28.643 7.15e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2514g00002 K13457 - mtr:25489074 665.611