Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2509g00003 ATGGAAGGTGAGAGAGGTGTTCCCAATTATGAGCTTCAAGTTTCATTCACAAGCACCCCTCAAGCCATTCATGAAATGGGTTTTGTTCAATTTGAAGAAAACCAGGTTTTTAGTTTCTTGGCAACCTCTTCACAATCCCAATCTTCTCAGCTCTCTCAATCTCTAAACGCTGGTAGCGGCAGCGGCAGTACCGTCGCTACAGCCGCCGCCGCCCCAACTACCGCAACCATAGGTTTCAGCCGTAATGACCTTGTTAGCAGAACTTCTTGGAATAACGAACAGGTGCGAACTCTGGATCCCAATAAGGCTATTAATGATGAAAATTGCACTGGAAATACTAGTGATGGCAACAACACATGGTGGAGGAGTGCAAGCTCAGAGAAGAGCAAAGTGAAAATGAGGAGGAAGCTTAGAGAGCCAAGGTTTTGTTTCCAAACAAGAAGTGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAGGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTATCGTTGCACCCATAACAACTGTAGGGTGAAGAAAAGAGTTGAACGACTCTCAGAAGATTGTCGTATGGTGATAACTACCTACGAAGGCAGACACAATCACTCTCCTTGTGACGACTCAAATTCATCTGAACATGAATGTTTTACCTCTTTTTGA 684 0.4371 MEGERGVPNYELQVSFTSTPQAIHEMGFVQFEENQVFSFLATSSQSQSSQLSQSLNAGSGSGSTVATAAAAPTTATIGFSRNDLVSRTSWNNEQVRTLDPNKAINDENCTGNTSDGNNTWWRSASSEKSKVKMRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2509g00003 227 SMART WRKY_cls 153 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2509g00003 227 ProSiteProfiles WRKY domain profile. 148 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2509g00003 227 FunFam WRKY transcription factor 57 139 213 - -
Gabi2509g00003 227 Gene3D WRKY domain 139 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2509g00003 227 SUPERFAMILY WRKY DNA-binding domain 145 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2509g00003 227 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 54 214 IPR044810 GO:0003700
Gabi2509g00003 227 MobiDBLite consensus disorder prediction 102 123 - -
Gabi2509g00003 227 Pfam WRKY DNA -binding domain 154 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2509g00003 Gabi-Chr2509 130508 136927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2509g00003 3 227 WRKY Transcription Factor Family AT2G44745 56.223 5.83e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2509g00003 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2509g00003 - - gmx:100800671 376.711