Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2508g00001 ATGGCCACCTTCATTTTAAGGTCTAATAAAGCAATCCATGCCTTGGGTTGGTTCTGTCTCCTGATGTTGGTGCATAAAGGTGCTGCCTATGAATTCATAGTTGGGGGCCAAAAGGGTTGGAGTGTTCCAAGTGATCCCAATTTTAATCCTTTCAATCAATGGGCAGAAAAGGGCCGTTTCCAAATGGGAGACTCCCTAGTGTTCAACTACCAATCTGGCCAAGACTCGGTGCTTTCTGTAAAGAGTGAAGACTATGCCAGTTGCAACACAGGTTCACCTTATGCAAAATTCTCTGATGGCCACACTGTCTTCAAACTAAACCAATCAGGGCCTCACTTCTTCATAAGTGGAAACAAAGATAACTGTCTCAAAAATGAGAAGTTAACAGTGATTGTGCTAGCTGATAGAAGCAACCGCAACTCATCAAACACCAACCAAACAAGCCCCGCTTCTCCACCTTCACCACAGTCATCATCTCCTTCACCAGCACCTTCAGGGCAAGAAGGTCAATCTCCACCTATGGAGTCAAACCCAACACCAGCTCCTGTCAGTGAACCTCCTCCTCATACTCCTAATGATGCTGCTTCAGTCTTTGTCAGCTTTACTAGCTCTGTTGGAACATTCATGGCTTCAGTTCTAGTTTTATCTCTCTAA 654 0.448 MATFILRSNKAIHALGWFCLLMLVHKGAAYEFIVGGQKGWSVPSDPNFNPFNQWAEKGRFQMGDSLVFNYQSGQDSVLSVKSEDYASCNTGSPYAKFSDGHTVFKLNQSGPHFFISGNKDNCLKNEKLTVIVLADRSNRNSSNTNQTSPASPPSPQSSSPSPAPSGQEGQSPPMESNPTPAPVSEPPPHTPNDAASVFVSFTSSVGTFMASVLVLSL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2508g00001 217 CDD OsENODL1_like 30 133 IPR041846 -
Gabi2508g00001 217 PANTHER BLUE COPPER PROTEIN 29 154 IPR039391 GO:0009055
Gabi2508g00001 217 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Gabi2508g00001 217 Gene3D - 30 146 IPR008972 -
Gabi2508g00001 217 MobiDBLite consensus disorder prediction 175 189 - -
Gabi2508g00001 217 FunFam Early nodulin-like protein 9 30 144 - -
Gabi2508g00001 217 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Gabi2508g00001 217 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Gabi2508g00001 217 MobiDBLite consensus disorder prediction 134 152 - -
Gabi2508g00001 217 MobiDBLite consensus disorder prediction 134 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2508g00001 Gabi-Chr2508 8498 9745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2508g00001 12 196 Phytocyanin Superfamily AT3G20570 50.811 2.59e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2508g00001 - - gmx:100781182 306.99