Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2507g00028 ATGATGATTGAAAATTCAAGTAATAAAGGTCAACAAGCCAAGCAAGAGGGTGATAGCAGTAATATTATTGAGAAGTTCTCCAAGGCACCCTCTACCTCAAGACAATGGACATCATTCAGAAATCCAAGAATTGTGAGAGTCTCACGTTCTTTGGGAGGAAAAGATAGGCATAGCAAGGTTTGCACCATAAGGGGACTCAGGGACCGGCGCATTAGGCTGTCTGTGCCCACAGCAATTCAATTATATGATCTTCAAGATAGGCTTGGGCTCAGCCAACCAAGCAAGGTCATAGATTGGTTGCTTGAAGCCACAAAACTTGATATTGATAAGCTCCCACCACTTCATATTCCTCAGGGTTTTGCTCAATTTCATCAACAAACCCTACTGCCTCATCATCATGAGTCAGGTACTACTCTATCCTCTCTTGGAGGCTTTTATGATGCTAATTCCCCATTTATGAAGGATAGGGGAAATCAAAACCTCATGGGAAATAGACTAAAAGGTAAGGAAGCTGCAAGTGTGTCCATCTCCAAAGAAGATGAACAAGAAAATCCAGATGGAATTGGTGGTTATAATAGGCAGAATTCAGCTCATAAGATCTTCCCCATTGGAAATAGCTCTTCTTTATCTGGGTTTCTAAACAATGTCATGACATTCAACTCTTACAATTCTCAGCCTTCAAGTTTATCTTTGTCCCAATTTGGAAGCCATGGATTATTTCCTTCCCAGGTAGATTCTGATCCAAGTAGTGGCAGTGCAGTGCAGTTTTCATCTTCTTTGCCTGTACCATTTGGTTCCCAATTACTTTTTTGTCCTTCTTCTCCTTCACTTTTTACTCCACATGCTCCATTTATGGTCAACTCAGAGGAAAGTGATCCAAGACAATTCAACCATATTCAGATCTTGAACTCAAGTTCTCAAGGAGTGTCTCATCCACCTCTTAGACGCCTTCCAACTCCATTTAGTTCCAGGCTTCTTGATTCAGATAAGGGTAATACTCGTTCTTGA 1008 0.4117 MMIENSSNKGQQAKQEGDSSNIIEKFSKAPSTSRQWTSFRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEATKLDIDKLPPLHIPQGFAQFHQQTLLPHHHESGTTLSSLGGFYDANSPFMKDRGNQNLMGNRLKGKEAASVSISKEDEQENPDGIGGYNRQNSAHKIFPIGNSSSLSGFLNNVMTFNSYNSQPSSLSLSQFGSHGLFPSQVDSDPSSGSAVQFSSSLPVPFGSQLLFCPSSPSLFTPHAPFMVNSEESDPRQFNHIQILNSSSQGVSHPPLRRLPTPFSSRLLDSDKGNTRS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2507g00028 335 MobiDBLite consensus disorder prediction 305 335 - -
Gabi2507g00028 335 ProSiteProfiles TCP domain profile. 53 111 IPR017887 -
Gabi2507g00028 335 MobiDBLite consensus disorder prediction 172 186 - -
Gabi2507g00028 335 Pfam TCP family transcription factor 53 164 IPR017887 -
Gabi2507g00028 335 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 273 IPR005333 GO:0003700
Gabi2507g00028 335 MobiDBLite consensus disorder prediction 169 193 - -
Gabi2507g00028 335 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2507g00028 Gabi-Chr2507 190134 191882 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2507g00028 36 124 TCP Transcription Factor Family AT5G60970 85.556 3.81e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi2507g00028 TCP 7.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2507g00028 - - gmx:100788984 365.155