Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2507g00002 ATGTCTCCTAATTGGTTTATTGGCTTTGCTACTATTGTAGCAGCCATCCTCATTCGCAAGCTTTTCAAGCTCATAACTCGTCCTTCCTTACCTCTACCACCAGGTCCACGACCATGGCCTATAGTCGGAAACTTACCTCACATGGGTCCTGTGCCACACCATGCACTCGCAGCCTTGGCTCGCACCCATGGCCCTCTCATGCACCTTCGTTTGGGTTTCGTTGACGTTGTGGTGGCCGCTTCCGCCTCCGTCGCCGAGCAGTTCTTGAAGGTTCATGATGCTAATTTCTGCAGCCGGCCACCGAACTCCGGCGCCAAATACATGGCTTATAACTATCAAGACCTTGTGTTTGCTCCCTACGGCCCACGGTGGCGGTTGCTCCGGAAAATAAGCTCCGTTCACATGTTCTCAGGCAAGGCCTTGGATGATTTTAGACACCTGCGGCAGGAAGAGGTTGCAAGACTGACAAGCAATTTAGCAAGTTCTGGCTCTAAAGCGGTGAACCTGGGACAACTGTTGAATGTGTGCACCACTAACGCATTGGCGAGGGTAATGATTGGACGGAGAGTGTTCAACGACGGCAACGGTGGCTGTGATCCCAGAGCGGATGAGTTTAAATCAATGGTGGTGGAGCTTATGGTATTGGCTGGAGTTTTCAATATCGGTGACTTCGTTCCTGCTTTGGAGTGGCTTGACCTTCAGGGAGTACAAGCCAAGATGAAGAAATTACACAAGAGGTTTGACGCATTTTTAGCCAGCATTGTTGAGGAACACAAGAACTCCAAGAGAGAGAAGCACCAAGACATGTTGAGTACGTTGTTGTCACTTAAAGATGATGAAGAGAAACTCACTGATACAGAGATCAAAGCATTACTTTTGAACATGTTCGCGGCTGGAACGGACACGTCATCAAGCACAACAGAATGGGCCATTGCTGAAATGATAAGGAACCCGAGAATTCTGGGCCGGGTCCAACAAGAAGTGGACAGTGTTGTGGGCCGGGACAGGCTTGTCACTGAATTGGATTTGCCTCACCTTCCTTACTTGGAGGCTGTGGTGAAGGAAACGTTTCGTCTTCACCCATCAACCCCTCTTTCTCTCCCACGAGTTGCTGCAGATAGTTGTGAGGTTTTCGGCTACCACATTCCTAAAGGTGCAACTCTGTTGGTCAATGTTTGGGCCATTGCACGTGACCCTAAGGAATGGCCTGAACCATTGAAGTTCAAGCCCGAAAGGTTCCTCCCCGGTGGTGAGAAAGGTGATGTTGATGTTAGGGGAAATGACTTTGAGGTTATACCTTTTGGTGCTGGACGTAGGATATGTGTTGGTATGAGCCTTGGGCTCAGGGTGGTTCAGTTGCTGACTGCAAACCTGGCTCATGCATTTGATTGGGAGCTTGAGAATGGGCTGAACCCTGAAAAGCTCAACATGGATGAAGCATATGGGCTTACCCTACAAAGAGCAGTGCCACTTTCGGTCCATCCTCGGCCCAGGCTCTCACCACATGTGTACTCATCATGA 1521 0.497 MSPNWFIGFATIVAAILIRKLFKLITRPSLPLPPGPRPWPIVGNLPHMGPVPHHALAALARTHGPLMHLRLGFVDVVVAASASVAEQFLKVHDANFCSRPPNSGAKYMAYNYQDLVFAPYGPRWRLLRKISSVHMFSGKALDDFRHLRQEEVARLTSNLASSGSKAVNLGQLLNVCTTNALARVMIGRRVFNDGNGGCDPRADEFKSMVVELMVLAGVFNIGDFVPALEWLDLQGVQAKMKKLHKRFDAFLASIVEEHKNSKREKHQDMLSTLLSLKDDEEKLTDTEIKALLLNMFAAGTDTSSSTTEWAIAEMIRNPRILGRVQQEVDSVVGRDRLVTELDLPHLPYLEAVVKETFRLHPSTPLSLPRVAADSCEVFGYHIPKGATLLVNVWAIARDPKEWPEPLKFKPERFLPGGEKGDVDVRGNDFEVIPFGAGRRICVGMSLGLRVVQLLTANLAHAFDWELENGLNPEKLNMDEAYGLTLQRAVPLSVHPRPRLSPHVYSS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2507g00002 506 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 FunFam Red aleurone1 25 496 - -
Gabi2507g00002 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Gabi2507g00002 506 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 PANTHER CYTOCHROME P450 98A9 9 505 - -
Gabi2507g00002 506 Pfam Cytochrome P450 33 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 SUPERFAMILY Cytochrome P450 33 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00002 506 Gene3D Cytochrome P450 26 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2507g00002 Gabi-Chr2507 29897 35071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2507g00002 32 504 Cytochrome P450 AT5G07990 70.981 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2507g00002 K05280 - gmx:547475 840.106