Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2507g00001 ATGGGTCCTGTGCCACACCATGCACTCGCAGCCTTGGCTCGCACCCATGGCCCTCTCATGCACCTTCGTTTGGGTTTCGTTGACGTTGTGGTGGCCGCTTCCGCCTCCGTCGCCGAGCAGTTCTTGAAGGTTCATGATGCTAATTTCTGCAGCCGGCCACCGAACTCCGGCGCCAAATACATGGCTTATAACTATCAAGACCTTGTGTTTGCTCCCTACGGCCCACGGTGGCGGTTGCTCCGGAAAATAAGCTCCGTTCACATGTTCTCAGGCAAGGCCTTGGATGATTTTAGACACCTGCGGCAGGAAGAGGTTGCAAGACTGACAAGCAATTTAGCAAGTTCTGGCTCTAAAGCGGTGAACCTGGGACAACTGTTGAATGTGTGCACCACTAACGCATTGGCGAGGGTAATGATTGGACGGAGAGTGTTCAACGACGGCAACGGTGGCTGTGATCCCAGAGCGGATGAGTTTAAATCAATGGTGGTGGAGCTTATGGTATTGGCTGGAGTTTTCAATATCGGTGACTTCGTTCCTGCTTTGGAGTGGCTTGACCTTCAGGGAGTACAAGCCAAGATGAAGAAATTACACAAGAGGTTTGACGCATTTTTAGCCAGCATTGTTGAGGAACACAAGAACTCCAAGAGAGAGAAGCACCAAGACATGTTGAGTACGTTGTTGTCACTTAAAGATGATGAAGAGAAACTCACTGATACAGAGATCAAAGCATTACTTTTGAACATGTTCGCGGCTGGAACGGACACGTCATCAAGCACAACAGAATGGGCCATTGCTGAAATGATAAGGAACCCGAGAATTCTGGGCCGGGTCCAACAAGAAGTGGACAGTGTTGTGGGCCGGGACAGGCTTGTCACTGAATTGGATTTGCCTCACCTTCCTTACTTGGAGGCTGTGGTGAAGGAAACGTTTCGTCTTCACCCATCAACCCCTCTTTCTCTCCCACGAGTTGCTGCAGATAGTTGTGAGGTTTTCGGCTACCACATTCCTAAAGGTGCAACTCTGTTGGTCAATGTTTGGGCCATTGCACGTGACCCTAAGGAATGGCCTGAACCATTGAAGTTCAAGCCCGAAAGGTTCCTCCCCGGTGGTGAGAAAGGTGATGTTGATGTTAGGGGAAATGACTTTGAGGTTATACCTTTTGGTGCTGGACGTAGGATATGTGTTGGTATGAGCCTTGGGCTCAGGGTGGTTCAGTTGCTGACTGCAAACCTGGCTCATGCATTTGATTGGGAGCTTGAGAATGGGCTGAACCCTGAAAAGCTCAACATGGATGAAGCATATGGGCTTACCCTACAAAGAGCAGTGCCACTTTCGGTCCATCCTCGGCCCAGGCTCTCACCACATGTGTACTCATCATGA 1380 0.5007 MGPVPHHALAALARTHGPLMHLRLGFVDVVVAASASVAEQFLKVHDANFCSRPPNSGAKYMAYNYQDLVFAPYGPRWRLLRKISSVHMFSGKALDDFRHLRQEEVARLTSNLASSGSKAVNLGQLLNVCTTNALARVMIGRRVFNDGNGGCDPRADEFKSMVVELMVLAGVFNIGDFVPALEWLDLQGVQAKMKKLHKRFDAFLASIVEEHKNSKREKHQDMLSTLLSLKDDEEKLTDTEIKALLLNMFAAGTDTSSSTTEWAIAEMIRNPRILGRVQQEVDSVVGRDRLVTELDLPHLPYLEAVVKETFRLHPSTPLSLPRVAADSCEVFGYHIPKGATLLVNVWAIARDPKEWPEPLKFKPERFLPGGEKGDVDVRGNDFEVIPFGAGRRICVGMSLGLRVVQLLTANLAHAFDWELENGLNPEKLNMDEAYGLTLQRAVPLSVHPRPRLSPHVYSS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2507g00001 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 387 396 IPR017972 GO:0005506|GO:0016705
Gabi2507g00001 459 Gene3D Cytochrome P450 1 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 SUPERFAMILY Cytochrome P450 3 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS E-class P450 group I signature 394 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS E-class P450 group I signature 129 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS E-class P450 group I signature 260 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS E-class P450 group I signature 384 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS E-class P450 group I signature 344 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS E-class P450 group I signature 13 32 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS E-class P450 group I signature 37 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS E-class P450 group I signature 303 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS E-class P450 group I signature 240 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 FunFam Cytochrome P450 82C4 1 449 - -
Gabi2507g00001 459 PANTHER CYTOCHROME P450 98A9 2 458 - -
Gabi2507g00001 459 Pfam Cytochrome P450 5 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS P450 superfamily signature 251 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2507g00001 459 PRINTS P450 superfamily signature 385 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2507g00001 Gabi-Chr2507 29813 35071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2507g00001 1 457 Cytochrome P450 AT5G07990 70.410 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2507g00001 K05280 - gmx:547475 787.334