Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2506g00016 ATGAAGTTGGGTGGAAGAAAACCTTCTTCTTCTAGGCCTTCTTTAATCTCTCATGTATCTCCTTTTTCATGGCTATCCAAGTTCAAGCAGATGAGAATCAACTCAGAGGCAAAACCTGAAAAACTGAAGCAGAATGAAAAGCTGAACTCTCCATCTGATAGTTCACCACACAATGCTTGTGGGAATAGAGGCAGGTTTTATGGTGGGGATGATGATGCTTTCTGGAGACTGTCATTTGGTGAAGAGGGTAATGAGCATAAGAAAAGGGAAGATATTCTGAAACCTGTAGGGTACAATTTGGATGCTGAGCATGTCATTCCATCCTCAAGTTGCACTAGTGGTAAACATAATGCTAAAAGACATGGAACAAGAGAAGGCACTTTGAAGTTCAAGAAGAAAGATGTTGGGCTGAGAGAAGATAGCAAATTGCTGAATGAAAAAAATAGTGCACAGGAACTTGAGTACTTAAGGAGGAGATATGAGAGGAAAGCACAAAGAATTTTGCAAGAGCAACTCTTGAAATTAGAAAAAGTATCAGAGGAAGCTGAATCTGCATCAAGTAAATCCTTAGAAAAGGATGTGCTGCAATTTGAATCCCCTAGGACAATTTGTACACCAAGAACACATTTGTTTTCCTCTTCTGTAGATTCAAAGAAATTGGGCTCTGAGAATTGGAAACAAACTCAGGAGTTGAAAGCAAAGATTAACAAGCATAGGCAATCACTTCATGTGAGTAGAGGAGTCCAAAGGAGGAAACCAAAGCACAGCACCAGGGTCAGAGTATATTCTCCAAGGATGACTTCCAAGGTTGAAATCTGCAAAATAAAGGGCATTGAAGACAAGAAGAAAGCAAAACTAAAGATGAAGAAAGAAGAGGAAATTGTGGAGGAAACAGCAGGGTTAGATAGCTTTGCTGTGGTGAAATGTTCCTTGGATCCACAACAAGATTTCAGAGATTCAATGATTGAGATGATCATAGAGAAACAGATCAGCCGGCCAGAAGAAATGGAAGAGCTCTTAGCATGTTATCTTACTTTGAATTCTAATGAGTATCATGATATCATCATCAGAGTTTTCAGGCAGGTATGGTTACATCTGAGCCAAGCTAGTTTGGGTATTAAATCAGATAAGCAATGTTGTTGTTATGATTATTAA 1155 0.3896 MKLGGRKPSSSRPSLISHVSPFSWLSKFKQMRINSEAKPEKLKQNEKLNSPSDSSPHNACGNRGRFYGGDDDAFWRLSFGEEGNEHKKREDILKPVGYNLDAEHVIPSSSCTSGKHNAKRHGTREGTLKFKKKDVGLREDSKLLNEKNSAQELEYLRRRYERKAQRILQEQLLKLEKVSEEAESASSKSLEKDVLQFESPRTICTPRTHLFSSSVDSKKLGSENWKQTQELKAKINKHRQSLHVSRGVQRRKPKHSTRVRVYSPRMTSKVEICKIKGIEDKKKAKLKMKKEEEIVEETAGLDSFAVVKCSLDPQQDFRDSMIEMIIEKQISRPEEMEELLACYLTLNSNEYHDIIIRVFRQVWLHLSQASLGIKSDKQCCCYDY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2506g00016 384 ProSiteProfiles OVATE domain profile. 306 365 IPR006458 -
Gabi2506g00016 384 MobiDBLite consensus disorder prediction 236 256 - -
Gabi2506g00016 384 Coils Coil 143 188 - -
Gabi2506g00016 384 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 154 367 IPR038933 GO:0045892
Gabi2506g00016 384 MobiDBLite consensus disorder prediction 238 256 - -
Gabi2506g00016 384 NCBIfam uncharacterized plant-specific domain TIGR01568 305 367 IPR006458 -
Gabi2506g00016 384 Pfam Transcriptional repressor, ovate 310 366 IPR006458 -
Gabi2506g00016 384 MobiDBLite consensus disorder prediction 35 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2506g00016 Gabi-Chr2506 230117 231271 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi2506g00016 Ovate 3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2506g00016 - - aprc:113859996 485.337