Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2506g00012 ATGGGAAGCCAAGATGTGAAGCTGTTAAGCTTTTGGGTAAGTCCATATGGTAAAAGGGTTGAGTGGGCCTTGAAACTCAAGGGTGTTGAGTATGAGTATGTAGAAGAAGATATCACCAACAAGAGCAGTCTTCTTCTGGAGTTGAACCCGGTTTCTAAGAAGGTTCCGGTTCTTGTCCATGATCAAAAAGCGATAGCTGAATCATTCATCATCCTCGAATACATTGATGAAACATGGAAGCAATATCCATTGTTACCTCAACATCCTTATCAAAGAGCTATTGCTCGCTTTTGGGCTATTTCTGCTGAACAAAAGCTTGGGAAGGTTGTATGGGTTGCAATGTGTACCATCGGGGATGAACGGGAAAAGTCACTGAAGGAAGCCAGAGAAGTAATGGATAAGATAGAAGAAGAGATTAAGGGGAAAAAATTCTTCGGTGGGGACAATATTGGGTACCTTGATATTGCACTTGGATGGATATCTTACTGGCTTCCTGTTTGGGAGGAAGTTGGATCAATTCAAATAATAGACCCATTGAAGTATTCAGCCACCACTGCATGGATGACCAATTTTCTCAGCCACCCTGTGATCAAGGACAGTTTGCCCCCTAGAGACAAGATGCTTGTTTACTACCACAATGCCAGAAACAAACGGGCTTCTACCCATCATGGTTTGCTCAAGGTTTAG 687 0.4279 MGSQDVKLLSFWVSPYGKRVEWALKLKGVEYEYVEEDITNKSSLLLELNPVSKKVPVLVHDQKAIAESFIILEYIDETWKQYPLLPQHPYQRAIARFWAISAEQKLGKVVWVAMCTIGDEREKSLKEAREVMDKIEEEIKGKKFFGGDNIGYLDIALGWISYWLPVWEEVGSIQIIDPLKYSATTAWMTNFLSHPVIKDSLPPRDKMLVYYHNARNKRASTHHGLLKV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2506g00012 228 SFLD Glutathione Transferase (cytosolic) 2 221 IPR040079 -
Gabi2506g00012 228 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
Gabi2506g00012 228 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Gabi2506g00012 228 Gene3D - 85 222 - -
Gabi2506g00012 228 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Gabi2506g00012 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Gabi2506g00012 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Gabi2506g00012 228 Pfam Glutathione S-transferase, C-terminal domain 119 195 IPR004046 -
Gabi2506g00012 228 FunFam Tau class glutathione S-transferase 85 221 - -
Gabi2506g00012 228 CDD GST_C_Tau 89 210 IPR045074 GO:0004364|GO:0006749
Gabi2506g00012 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 220 IPR010987 -
Gabi2506g00012 228 CDD GST_N_Tau 6 79 - -
Gabi2506g00012 228 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Gabi2506g00012 228 Gene3D Glutaredoxin 1 84 - -
Gabi2506g00012 228 Coils Coil 118 138 - -
Gabi2506g00012 228 FunFam Tau class glutathione S-transferase 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2506g00012 Gabi-Chr2506 198979 200261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2506g00012 2 210 Glutathione S-transferase Gene Family AT2G29420 44.498 2.01e-66 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2506g00012 K00799 - gmx:100305870 378.252