Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2506g00005 ATGGATAGTAAGTTATTCAGCAACAACAGCAACCGTTATATCAATAAGGAACAAGAAGAAACTGACGTATTAGCTCAGGAAAACATTGCCGAGTCCCCTCCTTCTTCCACCATGTTTAACATGGATGGCTTGGTTCCTTCCCCAACTAATTCTTCACTTAAGAAAAGGCGAGCCATACAAAAGAGGGTGGTGCAAATCCCAATTAAGGAAACAGAAGGGTCTAGGCTTAAAGGAGAGAGCAACACTCCACCGTCCGATTCATGGGCATGGAGAAAATACGGACAGAAACCCATCAAAGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCCAAGGGGTGTCCGGCAAGGAAACAAGTTGAAAGGAGCCACGTGGACCCCACCATGCTCGTCGTTACTTACTCCTCCGACCATAACCACCCTTGGCCAGTTTCTAGAAACCACCATCACTCCTCCTCCTCCTCCGCCGCCGCTAAACCCACTAAAAAACCCGAACCCGAACCGGAGGTCGTTGCGGAACCGGAACCCGAACCGGAGGATAATAAGTTTGCGGACCTCGCCGGGGACGAGTTGGGGTGGTTTGGCGAGATGGAGACGACGACGTCGTCGGCGGTTCTGGAGAGCCCGATAATGGCGGAGTACGACGCTGACGTGGCGTCGGTGTTATTGCCAATGAGAGAAGAGGACGAGTCTCTGTTCGCAGACCTCGGGGAACTGCCGGAGTGCTCGGTGGTGTTCAGGCGGGGAATGGTGGTGGAGCGCCGGCGGTACAGGGCGCCGTGGTGTGGGACCACAAGTTGA 807 0.5366 MDSKLFSNNSNRYINKEQEETDVLAQENIAESPPSSTMFNMDGLVPSPTNSSLKKRRAIQKRVVQIPIKETEGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSHVDPTMLVVTYSSDHNHPWPVSRNHHHSSSSSAAAKPTKKPEPEPEVVAEPEPEPEDNKFADLAGDELGWFGEMETTTSSAVLESPIMAEYDADVASVLLPMREEDESLFADLGELPECSVVFRRGMVVERRRYRAPWCGTTS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2506g00005 268 SUPERFAMILY WRKY DNA-binding domain 82 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2506g00005 268 Pfam WRKY DNA -binding domain 86 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2506g00005 268 MobiDBLite consensus disorder prediction 1 102 - -
Gabi2506g00005 268 Gene3D WRKY domain 74 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2506g00005 268 MobiDBLite consensus disorder prediction 141 186 - -
Gabi2506g00005 268 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 23 246 IPR044810 GO:0003700
Gabi2506g00005 268 MobiDBLite consensus disorder prediction 28 54 - -
Gabi2506g00005 268 ProSiteProfiles WRKY domain profile. 85 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2506g00005 268 SMART WRKY_cls 84 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2506g00005 268 MobiDBLite consensus disorder prediction 141 161 - -
Gabi2506g00005 268 FunFam WRKY transcription factor 65 62 145 - -
Gabi2506g00005 268 MobiDBLite consensus disorder prediction 164 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2506g00005 Gabi-Chr2506 114239 115926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2506g00005 25 249 WRKY Transcription Factor Family AT1G29280 60.417 3.48e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2506g00005 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2506g00005 - - gmx:100127392 366.696