Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2506g00004 ATGGATAGTAAGTTATTCAGCAACAACAGCAACCGTTATATCAATAAGGAACAAGAAGAAACTGACGTATTAGCTCAGGAAAACATTGCCGAGTCCCCTCCTTCTTCCACCATGTTTAACATGGATGGCTTGGTTCCTTCCCCAACTAATTCTTCACTTAAGAAAAGCAGGCGAGCCATACAAAAGAGGGTGGTGCAAATCCCAATTAAGGAAACAGAAGGGTCTAGGCTTAAAGGAGAGAGCAACACTCCACCGTCCGATTCATGGGCATGGAGAAAATACGGACAGAAACCCATCAAAGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCCAAGGGGTGTCCGGCAAGGAAACAAGTTGAAAGGAGCCACGTGGACCCCACCATGCTCGTCGTTACTTACTCCTCCGACCATAACCACCCTTGGCCAGTTTCTAGAAACCACCATCACTCCTCCTCCTCCTCCGCCGCCGCTAAACCCACTAAAAAACCCGAACCCGAACCGGAGGTCGTTGCGGAACCGGAACCCGAACCGGAGGATAATAAGTTTGCGGACCTCGCCGGGGACGAGTTGGGGTGGTTTGGCGAGATGGAGACGACGACGTCGTCGGCGGTTCTGGAGAGCCCGATAATGGCGGAGTACGACGCTGACGTGGCGTCGGTGTTATTGCCAATGAGAGAAGAGGACGAGTCTCTGTTCGCAGACCTCGGGGAACTGCCGGAGTGCTCGGTGGTGTTCAGGCGGGGAATGGTGGTGGAGCGCCGGCGGTACAGGGCGCCGTGGTGTGGGACCACAAGTTGA 810 0.537 MDSKLFSNNSNRYINKEQEETDVLAQENIAESPPSSTMFNMDGLVPSPTNSSLKKSRRAIQKRVVQIPIKETEGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSHVDPTMLVVTYSSDHNHPWPVSRNHHHSSSSSAAAKPTKKPEPEPEVVAEPEPEPEDNKFADLAGDELGWFGEMETTTSSAVLESPIMAEYDADVASVLLPMREEDESLFADLGELPECSVVFRRGMVVERRRYRAPWCGTTS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2506g00004 269 ProSiteProfiles WRKY domain profile. 86 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2506g00004 269 MobiDBLite consensus disorder prediction 142 162 - -
Gabi2506g00004 269 MobiDBLite consensus disorder prediction 165 187 - -
Gabi2506g00004 269 SMART WRKY_cls 85 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2506g00004 269 MobiDBLite consensus disorder prediction 28 55 - -
Gabi2506g00004 269 Gene3D WRKY domain 75 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2506g00004 269 FunFam WRKY transcription factor 65 65 146 - -
Gabi2506g00004 269 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 26 247 IPR044810 GO:0003700
Gabi2506g00004 269 SUPERFAMILY WRKY DNA-binding domain 83 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2506g00004 269 MobiDBLite consensus disorder prediction 1 126 - -
Gabi2506g00004 269 Pfam WRKY DNA -binding domain 87 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2506g00004 269 MobiDBLite consensus disorder prediction 142 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2506g00004 Gabi-Chr2506 114239 115926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2506g00004 25 250 WRKY Transcription Factor Family AT1G29280 60.996 3.08e-81 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2506g00004 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2506g00004 - - gmx:100127392 365.155