Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2504g00027 ATGCTAACCACGAGCGTTAAAAACCGATCCAAGGGGCAAGGACTTGTACGAGGAATCGAAATCTTTTTTATCTTGCAAGGAACACTTGCAATCTACAAAACGCGAAAGCTCAAACCCTTCTCCTCCAAGGACTGTACAGCACTTGCAAGGAACACCTCACACCATACAATGCTACTCGTAATCTTTCTGATCTTCCTTATTTTGTTTCTGCTAGTGAAATGGTATTCCAAATCTACAAAACGCGAAAGCTCAACCCCTTCTCCTCCAAAATTCCCTATTATAGGAAATCTCCATCAACTTGGCTTGTACCCTCACCGCACACTTCAATCTTTAGCTAAAAAATATGGCCCTTTGATGTTGCTCCATCTTGGGAGTGTGCCAGCTCTTGTGATCTCATCTGCTGAAGCCGCACGTGAGGTTATGAAAACCCACGACCGTATCTTTGCAAACAGACCCCAAATGAAACTCTGTGACATACTTTTATATGAATCCAAAGATGTCTCAGCAGCTCCATATGGAGAGTACTGGAGACAGATTAGGAGCATCTCTGTCTTACATCTTCTCAGTGTGAAAAGGGTTCAATCTCTTCGTGCCGTGAGAGAGGAAGAAACTTCCATAATGATGGAAAAAATAAGGCACTCTTCTTCTTCCTTCCTACCGGTGAATTTAAGTAAATTACTCTCCACAACCACCAATGATATAGTTTGTAGGGTCGCTTTGGGAAGAAAATATGGTGGAGAAAGTGGGAGGCAATTCAAGGAGTTGTTGATGGATTTTACAGAGCTACTTGGTACTTTTGTTGTTGGGGACTTTGTGCCTTGGCTCGATTGGTTAACCCGAGTTTCTGGATTGTATTCTAGAGCAAACAGAGTGGCTAAACAGTTGGATGATTTTTTGGAAGAAGTGGTTGAAGAGCATATAAATCATCAGAATGAAGCCAGCAATCAGCATGGTCGTTCAGATACTGAAGGCCATAATGATTTTGTTCACGTTTTGCTTGAGATTCAAAGGACAAACACGATTGGCTTCCCCATTGGCAGAACTGTCATAAAGGCTTTGATATTGGATATGTTTGCTGCAGGTACGGACACTACATCTACCTTCCTAGAGTGGGCAATGACAGAACTCTTGAGGCATCCAGTTATCATGAAGAAACTGCAAGATGAAGGGAGGAATGTTGCTGGTAATAGAACTCACATAACTGAAGAGGATTTGGGTCACATGCAATACTTAAAGGCTGTGGTTAAAGAAATTCTGCGCTTGCATCCCCCAATTCCATTACTAGTCCCACGAGAAAGCATGCAAGATATCAAATTGAACGGGTACCACGTTAAAGCTGGCACACGAGTAATTGTAAATGCTTGGGCCATTGCAAGAGATCCTTCATATTGGGATCAACCTGAAGAGTTCAAGCCTGAGAGGTTCTTGAATAGTTCAGTAGATTTCAAAGGGAATGATTTCCAATTGATTCCGTTTGGAGCAGGGAGGAGGGGTTGCCCAGGAATTGTGTTTGCTGATGTTGTTAATGAGCTTGTTCTTGCCAACCTTGTCCACCAATTTGATTGGACATTACCCGGTGGAGCAGCAATGGAAACCTTGGATATGTCCGAAACTGTTGGCTTAACCATGCATAGAAAGAGTCCCCTTATAGCAGTTGCTGCTCCTACATAA 1671 0.4279 MLTTSVKNRSKGQGLVRGIEIFFILQGTLAIYKTRKLKPFSSKDCTALARNTSHHTMLLVIFLIFLILFLLVKWYSKSTKRESSTPSPPKFPIIGNLHQLGLYPHRTLQSLAKKYGPLMLLHLGSVPALVISSAEAAREVMKTHDRIFANRPQMKLCDILLYESKDVSAAPYGEYWRQIRSISVLHLLSVKRVQSLRAVREEETSIMMEKIRHSSSSFLPVNLSKLLSTTTNDIVCRVALGRKYGGESGRQFKELLMDFTELLGTFVVGDFVPWLDWLTRVSGLYSRANRVAKQLDDFLEEVVEEHINHQNEASNQHGRSDTEGHNDFVHVLLEIQRTNTIGFPIGRTVIKALILDMFAAGTDTTSTFLEWAMTELLRHPVIMKKLQDEGRNVAGNRTHITEEDLGHMQYLKAVVKEILRLHPPIPLLVPRESMQDIKLNGYHVKAGTRVIVNAWAIARDPSYWDQPEEFKPERFLNSSVDFKGNDFQLIPFGAGRRGCPGIVFADVVNELVLANLVHQFDWTLPGGAAMETLDMSETVGLTMHRKSPLIAVAAPT 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2504g00027 556 SUPERFAMILY Cytochrome P450 86 553 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 Gene3D Cytochrome P450 70 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS E-class P450 group I signature 369 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS E-class P450 group I signature 453 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS E-class P450 group I signature 499 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS E-class P450 group I signature 136 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS E-class P450 group I signature 489 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS E-class P450 group I signature 112 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS E-class P450 group I signature 230 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS E-class P450 group I signature 349 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS E-class P450 group I signature 412 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 Pfam Cytochrome P450 86 547 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS P450 superfamily signature 490 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PRINTS P450 superfamily signature 360 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00027 556 PANTHER CYTOCHROME P450 71B11-RELATED 66 553 - -
Gabi2504g00027 556 CDD CYP71-like 114 549 - -
Gabi2504g00027 556 FunFam Cytochrome P450 83B1 71 552 - -
Gabi2504g00027 556 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 492 501 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2504g00027 Gabi-Chr2504 299376 302225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2504g00027 77 556 Cytochrome P450 AT3G48270 54.470 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2504g00027 - - gmx:100819183 668.307