Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2504g00025 ATGATAAAGGAGGCAATCGTTATGCATGATTTGCGTATGATCCATACTGACCTGAAGCCTGAAAATATACTTTTAGTTTCACCAGAGTATGTCAAAGTTCCTGACTACAAGGGTTCATCTAGATCACCCAGTTCCTATTTCAAGAGAGTGCCCAAGTCAAGTGCTATTAAGGTTATTGATTTTGGCAGCACCACCTATGAGCGAGAAGATCAGAATTATATTGTATCAACACGTCATTATAGGGCACCTGAAGTTATCCTTGGACTTGGCTGGAGTTATCCATGTGATATATGGAGTGTAGGATGTATATTGGTTGAGTTATGCACGGGCGAAGCCTTGTTTCAGACTCACGAGAATCTAGAGCACCTGGCCATGATGGAGAGGGTACTTGGTCCATTACCACAGCACGTGCTGAAGAGAGTTGACCGACATGCCGAGAAGTATGTTAGAAGGGGTAGATTAGACTGGCCAGTGGGTGCAACCTCTAGGGAAAGTATTAAAGCTGTAATGAAGCTTCCTAGACTACAGAACCTTATAATGCAGCATGTTGATCATTCAGCTGGTGATCTCATACATCTCTTGCAGGGGTTACTTAGATTTGACCCCTCTGAAAGACTTACAGCGAAGGAAGCTTTGAGGCATTCCTTTTTTATGAGAGATCTCCTTCGGAGATGA 675 0.4326 MIKEAIVMHDLRMIHTDLKPENILLVSPEYVKVPDYKGSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHVLKRVDRHAEKYVRRGRLDWPVGATSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRFDPSERLTAKEALRHSFFMRDLLRR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2504g00025 224 FunFam Serine/threonine-protein kinase AFC2 1 217 - -
Gabi2504g00025 224 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2504g00025 224 SMART serkin_6 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2504g00025 224 Pfam Protein kinase domain 8 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2504g00025 224 ProSitePatterns Serine/Threonine protein kinases active-site signature. 13 25 IPR008271 GO:0004672|GO:0006468
Gabi2504g00025 224 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 8 219 - -
Gabi2504g00025 224 SUPERFAMILY Protein kinase-like (PK-like) 8 220 IPR011009 -
Gabi2504g00025 224 Gene3D Transferase(Phosphotransferase) domain 1 7 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2504g00025 Gabi-Chr2504 249046 251632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2504g00025 8 217 MAP Kinase Gene Family AT3G59790 27.962 4.76e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Gabi2504g00025 Pkinase 7.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2504g00025 K08287 - gmx:100804452 426.017