Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2504g00022 ATGGCTTTTATCAAACAATGGCCGTATGAGCAAAGGATGGGAGTGTTCTTTTCTACCTTTCACATATCTCTTTTCTTGTTTATCAGCTTCCTGTTTGTGTTTAAATTAATAAGAAGAACCAAATCCAAAACCAATCTAAATGTGACTCCATCTCCACCAAAACTTCCGGTCATCGGAAATCTTCATCAATTAGGCACACTGCCACACCGCTCTCTGCGTGATCTCTCACTCAAATATGGTGATATGATGATGCTTCAGTTAGGGCAGATGAAGACTCCAACTTTGGTGATTTCATCTGCGGAGGTGGTCATGGAAATTATGAAAAATCATGACCTAGCTTTTTCGAACCGACCCCAAAACACAGCTGCAAAAATCTTGTTGTATGGATCTACAGACATTACTTTTGAACTCTATGGAGAAAAGTGGAGGCAAAAAAGGAAAATATGTGTCCTTGAAATTCTGAGCATGAAAAGAGTGCAATCATTTGGTCTCATCAGAGAAGAAGAAATTGCAGAATTGGTGTATAAGCTACGTGAAGCAAGCTCGAGTGATGCATGCTATGTGAATCTAAGCGAGATGCTAATTTCAACATCAAACAACATCGCTTGTAAATGCGCTTTTGGACAGAAGTATGCAGGGGATGGTTATAGCAGAGTCAAAGAGTTAGCAAGGAATGTTATGGTTCACCTTGCAGCTTTCACTGTCAGAGATTACTTCCCTTTGTTGGGTTGGGTTGATGTTCTAAGTGGAAAAATTCAGGAATTCAAGGCCACTTTTGGAGAATTGGATGCTTTATTTGATGAGGTAATTGCTGAGCATTTGACATTGAAGACAGAAGGTGACCACTCCAAAAAGAAAGACTTCGTGGATATACTCCTCAAACTTCAACAGGATAACATGCTTAACTTTGAGCTCACCAAAAATGACATCAAAGCACTTTTATTGGACATGTTTGTGGGAGGAAATGACACAACTTCAGCAACATTAGAATGGGCTTTTTCAGAGCTTATGAGAAATCCAATCGTAATGAAGAAAGCACAGGAAGAAGTGAGAAGAGTTGTAGGTCATAAATCAAAAGTAGAAGAAAATGACATCAATCAAATGCACTACCTAAAGTGTGTGGTCAAAGAGACCCTAAGGTTACATCCACCTGCTACTCTTTTGGCTCCTCGAGAAACAATATTTGGTGTGAAACTGAAAGGATATGATATTCCTGCAAAAACAATGGTATATATCAATGCATGGGCAATTCAAAGGGACCCTAAATTTTGGGAAAGCCCTGAAGAGTTTCTGCCTGAGAGATTTGAAAATAGCCAAGTTGATTTTAAAGGTCAAGACTTTCAATTTATTCCATTCGGTTTTGGGAGAAGGGGATGCCCTGGAGTGAATTTTGGACTTTCTTCTGTTGAGTATATGCTTGCCAACCTTCTTTATTGGTTCGATTGGAAGTTGCCTGAGATGGACACACCTACACACGATATAGATATGAACGAGATCTTTGGTCTCGTTGTCTCAAAGAAAGTACCACTACATCTTAAACCAATAACTCTTTTCATTTTAATATAA 1566 0.3895 MAFIKQWPYEQRMGVFFSTFHISLFLFISFLFVFKLIRRTKSKTNLNVTPSPPKLPVIGNLHQLGTLPHRSLRDLSLKYGDMMMLQLGQMKTPTLVISSAEVVMEIMKNHDLAFSNRPQNTAAKILLYGSTDITFELYGEKWRQKRKICVLEILSMKRVQSFGLIREEEIAELVYKLREASSSDACYVNLSEMLISTSNNIACKCAFGQKYAGDGYSRVKELARNVMVHLAAFTVRDYFPLLGWVDVLSGKIQEFKATFGELDALFDEVIAEHLTLKTEGDHSKKKDFVDILLKLQQDNMLNFELTKNDIKALLLDMFVGGNDTTSATLEWAFSELMRNPIVMKKAQEEVRRVVGHKSKVEENDINQMHYLKCVVKETLRLHPPATLLAPRETIFGVKLKGYDIPAKTMVYINAWAIQRDPKFWESPEEFLPERFENSQVDFKGQDFQFIPFGFGRRGCPGVNFGLSSVEYMLANLLYWFDWKLPEMDTPTHDIDMNEIFGLVVSKKVPLHLKPITLFILI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2504g00022 521 Gene3D Cytochrome P450 34 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 FunFam Cytochrome P450 83B1 35 513 - -
Gabi2504g00022 521 Pfam Cytochrome P450 50 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 Coils Coil 343 363 - -
Gabi2504g00022 521 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00022 521 CDD CYP71-like 78 510 - -
Gabi2504g00022 521 PANTHER CYTOCHROME P450 71B11-RELATED 32 515 - -
Gabi2504g00022 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Gabi2504g00022 521 SUPERFAMILY Cytochrome P450 50 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2504g00022 Gabi-Chr2504 228618 230327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2504g00022 50 514 Cytochrome P450 AT3G26330 45.957 2.49e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2504g00022 K20617 - gmx:100803922 794.267