Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2504g00021 ATGGCTCTCAAACAATGGCCGAATGAGCAAATGAAAGGAGTGTTCTTTTCTACCCTTTATCTATCTCTTTTCTTCTTTATCAGCGTCCTCTTTGTGTTTAAGCTAACAAAAAGAATCAAATCCAAAACCAATCTAAAAGTGCCTCCATCTCCATCAAAACTACCACTCATAGGAAATCTTCATCAATTGGGCACACTGCCACACCGCTCTCTGCGTGACCTCTCACTCAAATATGGTGATATGATGATGCTTCAGTTAGGGCAGATGAAGTCTCCAACTCTGGTGGTTTCATCTGCAGATGTGGCCATGGAAATGATGAAAACTCATGACCTAGCTTTTTCCAACCGACCCCAAAACACAGCTGCAAAAATCTTATTGTATGGATGTACGGACGTTGGTTTTGCCCACTACGGAGAAAACTGGAGACAAAAAAGAAAAATATGTGTCCTTGAACTTCTGAGCATAAAAAGAGTGCAATCATTTCGTCTCATCAGAGAAGAAGAAGTTGCAGAATTGGTGAATAAGCTACGTGAAGCGAGCTCGAGTGATGCATGCTATGTGAATCTAAGCGACATGCTTATTTCAACATCAAACAACATCGTTTGTAAATGTGCTCTTGGAAGGAAGTATACAGGAGATGGTTACAACAGGGTCAAAGAGTTAGCAAGGAATGCTATGATTCACCTTTCAGCTTTCACTGTGAGAGATTACTTTCCTTTGTTGGGTTGGGTTGATGTTCTCAGTGGCAAAATTCAGGAATTCAAGGCCACTTTTGGAGAATTTGATGCTTTATTTGATGAGGTAATTGCTGAGCATTTGACATTGAAGACGGAAGGTGACAGCTCCAAAAAGAAAGACTTCGTGGATATCCTCCTCAAACTTCAACAGGATAACATGCTTAACTTTGAGCTCACCAAAAATGACCTCAAAGCACTTCTAATGGACATGTTTGTGGGAGGATCTGACACAACTGCAACAACATTAGAATGGGCTTTTTCGGAGCTTTTGAGAAATCCAATGGTAATGAAAAAAGCACAGGAAGAAGTGAGAAAAGTTGTAGGGCATAAATCAAAAGTCGAAGAAAATGACGTCAATCAAATGCACTATCTGAAGTGTGTGGTCAAAGAGACCCTAAGGCTACATCCACCTGCTACTCTTTTGGCTCCTCGAGAAACAATATTTGGTGTGAAACTGAACGGATATGATATTCCTGCAAAAACAATGGTATATATCAATGCATGGGCAATTCAAAGGGACCCTAAATTTTGGGAAAGCCCTGAAGAGTTTCTGCCAGAGAGATTTGAAAATAGCCAAGTTGATTTTAAAGGTCAAGACTTTCAATTTATTCCGTTCGGTTTTGGGAGAAGGGGATGTCCTGGAGTGAATTTTGGACTTTCTTCTGTTGAGTATATGTTTGCCAACCTTCTTTATTGGTTCGATTGGAAGTTGCCTGAGATGGATACACCTATACACGATATAGATATGAACGAGATATTTGGACTCGTTGTCTCTAAAAAAGTACCACTGCATCTTAAACCAATAACTTTTTTATTTTAA 1557 0.3976 MALKQWPNEQMKGVFFSTLYLSLFFFISVLFVFKLTKRIKSKTNLKVPPSPSKLPLIGNLHQLGTLPHRSLRDLSLKYGDMMMLQLGQMKSPTLVVSSADVAMEMMKTHDLAFSNRPQNTAAKILLYGCTDVGFAHYGENWRQKRKICVLELLSIKRVQSFRLIREEEVAELVNKLREASSSDACYVNLSDMLISTSNNIVCKCALGRKYTGDGYNRVKELARNAMIHLSAFTVRDYFPLLGWVDVLSGKIQEFKATFGEFDALFDEVIAEHLTLKTEGDSSKKKDFVDILLKLQQDNMLNFELTKNDLKALLMDMFVGGSDTTATTLEWAFSELLRNPMVMKKAQEEVRKVVGHKSKVEENDVNQMHYLKCVVKETLRLHPPATLLAPRETIFGVKLNGYDIPAKTMVYINAWAIQRDPKFWESPEEFLPERFENSQVDFKGQDFQFIPFGFGRRGCPGVNFGLSSVEYMFANLLYWFDWKLPEMDTPIHDIDMNEIFGLVVSKKVPLHLKPITFLF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2504g00021 518 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PANTHER CYTOCHROME P450 71B11-RELATED 30 514 - -
Gabi2504g00021 518 SUPERFAMILY Cytochrome P450 48 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 FunFam Cytochrome P450 83B1 34 512 - -
Gabi2504g00021 518 Gene3D Cytochrome P450 33 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Gabi2504g00021 518 Pfam Cytochrome P450 48 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2504g00021 518 Coils Coil 342 362 - -
Gabi2504g00021 518 CDD CYP71-like 77 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2504g00021 Gabi-Chr2504 218645 220343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2504g00021 48 517 Cytochrome P450 AT3G26330 45.895 2.77e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2504g00021 K20617 - gmx:100803922 806.594