Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2504g00002 ATGACGACGAGGTTCAAGAAGAACAGGAAGAAGAGAGGCCACGTCAGCGCCGGCCACGGTCGTATCGGAAAACACCGTAAGCACCCTGGAGGTCGTGGTAACGCCGGTGGCATGCACCACCACCGAATCCTGTTCGACAAATATCACCCCGGTTACTTCGGGAAGGTTGGAATGCGTTACTTCCACAAGCTCCGCAACAAGTTCTATTGCCCCATTGTCAACATCGACAAGCTGTGGTCTTTGGTTCCCCAAGAGGTTAAGGACAATCCTTCTAAGGATAAGGCACCATTGATCGATGTCACCAACTTCGGGTTCTTTAAGGTTTTGGGCAAGGGGGTTTTGCCACAGAACCAGCCCCTCGTCGTTAAGGCCAAACTCGTTTCCAAGATTGCTGAGAAGAAGATCAAGGAGGCTGGAGGTGCCGTTGTCCTCACCGCTTGA 441 0.5238 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLWSLVPQEVKDNPSKDKAPLIDVTNFGFFKVLGKGVLPQNQPLVVKAKLVSKIAEKKIKEAGGAVVLTA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2504g00002 146 FunFam 60S ribosomal protein L27a 58 146 - -
Gabi2504g00002 146 Gene3D - 58 146 - -
Gabi2504g00002 146 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 146 - -
Gabi2504g00002 146 ProSitePatterns Ribosomal protein L15 signature. 107 139 IPR001196 GO:0003735|GO:0005840|GO:0006412
Gabi2504g00002 146 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 IPR021131 -
Gabi2504g00002 146 Hamap 50S ribosomal protein L15 [rplO]. 1 145 IPR030878 GO:0003735|GO:0006412|GO:0015934
Gabi2504g00002 146 SUPERFAMILY Ribosomal proteins L15p and L18e 6 145 IPR036227 -
Gabi2504g00002 146 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2504g00002 Gabi-Chr2504 9484 10130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2504g00002 1 146 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 87.671 5.32e-93 264