Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2503g00015 ATGGCTCAGACTACACCAAATCACACACAAACCGTATCTGGTTGGGCAGCTCATGATTCTTCTGGCAAGATTACCCCATTCACCTTCAAAAGAAGGGAAAACGGAGTTAATGATGTGACCATACAGATCCTGTATTGTGGGATTTGCCACACTGACCTCCACTATGCTAAAAATGACTGGGGCATCACTATGTATCCTGTTGTACCCGGGCACGAGATCATTGGGGTGATAACTAAGATGGGGAGCGAAGTGAAGGGTTTCAATGAAGGAGAGAGAGTAGGGGTGGGGTGTTTGGCAGCTACATGTTTGGATTGTGAGTACTGCAAGAGCGATCAAGAGAACTATTGCGAACAGTTGCAATTTTCATACAACGGAGTTTTCTGGGATGGCAGCATCACCTATGGGGGCTACTCCGAAATGTTCGTCGCTGATTACAGATATGTGGTGCACATTCCGGAAAACCTGTCAATGGACGCAGCAGCTCCTCTACTGTGTGGGGGCATAACAGTATTCAATCCATTGAAAGAGCACGGTTTGGTAGAATCAGGAGGCAAAAAGATTGGGGTGGTTGGTTTAGGAGGACTTGGACATATAGCTGTCAAATTTGGCAAGGCATTTGGTCACCATGTTACTGTTATCAGCAGTTCTCCGTCCAAAGAAGCAGAGGCTAAGCAGCGTTTGGGAGCAGATGATTTCATTGTTAGCTCCAACCCCAACCAATTGAAGGGTGCGAGGAGAAGCCTAGATTTCATTTTGGATACTGTATCAGCAGAGCACTCTCTCATATCCATCTTGGAATTGCTCAAAGTAAACGGCACTTTATTTATCGTGGGTGCACCGTCCAAGCCATTCGAATTACCTGCTTTCCCATTGATATTTGGCAAGAGATCAGTGAAAGGTGGCATCATAGGGGGAATAAAAGAGACGCAGGAGATGTTGGACGTTTGTGCGAAGCACAATATCACGTGTGACATTGAGTTGATCACAACAGACAGAATCAACGAGGCTATGGAGCGCCTTGCTAAGAATGATGTCCGCTACCGTTTCGTCATTGACATTGCTGGCAGCTCAAAACGCTAG 1080 0.463 MAQTTPNHTQTVSGWAAHDSSGKITPFTFKRRENGVNDVTIQILYCGICHTDLHYAKNDWGITMYPVVPGHEIIGVITKMGSEVKGFNEGERVGVGCLAATCLDCEYCKSDQENYCEQLQFSYNGVFWDGSITYGGYSEMFVADYRYVVHIPENLSMDAAAPLLCGGITVFNPLKEHGLVESGGKKIGVVGLGGLGHIAVKFGKAFGHHVTVISSSPSKEAEAKQRLGADDFIVSSNPNQLKGARRSLDFILDTVSAEHSLISILELLKVNGTLFIVGAPSKPFELPAFPLIFGKRSVKGGIIGGIKETQEMLDVCAKHNITCDIELITTDRINEAMERLAKNDVRYRFVIDIAGSSKR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2503g00015 359 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0016616
Gabi2503g00015 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Gabi2503g00015 359 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Gabi2503g00015 359 CDD CAD1 14 352 IPR047109 GO:0016616
Gabi2503g00015 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Gabi2503g00015 359 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Gabi2503g00015 359 SUPERFAMILY GroES-like 17 183 IPR011032 -
Gabi2503g00015 359 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Gabi2503g00015 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Gabi2503g00015 359 Gene3D - 166 323 - -
Gabi2503g00015 359 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Gabi2503g00015 359 FunFam probable cinnamyl alcohol dehydrogenase 15 172 - -
Gabi2503g00015 359 Gene3D - 15 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2503g00015 Gabi-Chr2503 233317 237168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2503g00015 14 356 Monolignol Biosynthesis Gene Families AT2G21730 57.558 9.68e-143 407