Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2503g00011 ATGGAGAACAGAGCAAGAGGGAAAGGCAAAGTGAAGGAGGGGACATGGCAAGGCAACCGTCAAGTTCTTGGAGACATTGGTAATGTGGAGGTGCTTAGAATCGCTGATGGGAAGCAGATTTCACGGCCCATCACAAGGAGTTTCCATGCAAAATTGTTGGCAGAAGGACACAAAACTCCGGCTGATTGGGTACTGGGATTAGAAGTTCAAACTAACGAGCAAGCACCTGCACAAGGAAAGAAAAAGGTTATTGTACCTGTACTAGACAATAAAGCAATTGCTTACGAGGGTGTAGAAGATTTGACTCACAAGCCAAATCCTGAGCCCGTAGATGTGGTTAGTTCTGAAGCTGGAGAAAAAATTGATTTTGTTCTTGAAAGAAAGTCCAGGGAAAGATCTTCTAAGAAGGTCAAGAGTCTGACTTCACAAATTATTACCCAAAGCAAGGCTGCTTGTGGAATTTTGATTGTGGCTGAGGATCAGCAGCCTGTTGATGTTGATGCAGATGTTGCTAATGATGAACTTGCAGTAGTTGAATACATTGACGATATATACAAATTCTATAAGCTAACAGAAGATGAGATTCGACTATCAGATTACATGAAATCACAGCATGAAATTACTGAGAAGATGAGGTCTATTATTGTGGACTGGCTGGTTGAAGTCCATATGAGATTTGAATTAATGCCTGAGACACTCTATCTTACCATAAATATAATTGATCGATACCTCTCATTGACAGTTGTACCAAAAAATCAATTACAGTTAGTGGGCATAAGCTCAATGCTCATAGCTTGCAAATATGAAAAGATATGCACTCCTCGGGTTAATGACTTTATTAGCATATCAGATAATGCTTACACCAAGAATCAGATAATTTCAATGGAGACAGAAATTCTAGAGAAGTTAGAATGGTATTTAACTGTTCCCACGCCCTATGTGTTTTTAGTTAGACTCATCAGAGCTTCTGTTCCGCCAGATCAGGAGATGGAGAACATGGTGTTTTTCCTTGCTGAACTTGGTCTTGTGCATTATCAAGCCATTATTTTGTACTGCCCTTCATTGATTGCTGCGGCAGCCGTGTATGCTGCTCGTTGTACACTCAAAAGGTGTCCCTTCTGGAGTGAAATTCTAAAGAACCTAGCCGGCTACTGCACGGAACAGATAATAGATTGTGCCATGCTGTTAGTTAGCTTACACGCAAGAGCTGCAGATAGTAAACTCCAAGCAGTGTACCAGAAATTCTTAAGTCTAGACAGAGGGGCTGTTTCTCTTTTATCTCCAACAGAAGATATAGTAAAAAATTCCTAG 1311 0.4066 MENRARGKGKVKEGTWQGNRQVLGDIGNVEVLRIADGKQISRPITRSFHAKLLAEGHKTPADWVLGLEVQTNEQAPAQGKKKVIVPVLDNKAIAYEGVEDLTHKPNPEPVDVVSSEAGEKIDFVLERKSRERSSKKVKSLTSQIITQSKAACGILIVAEDQQPVDVDADVANDELAVVEYIDDIYKFYKLTEDEIRLSDYMKSQHEITEKMRSIIVDWLVEVHMRFELMPETLYLTINIIDRYLSLTVVPKNQLQLVGISSMLIACKYEKICTPRVNDFISISDNAYTKNQIISMETEILEKLEWYLTVPTPYVFLVRLIRASVPPDQEMENMVFFLAELGLVHYQAIILYCPSLIAAAAVYAARCTLKRCPFWSEILKNLAGYCTEQIIDCAMLLVSLHARAADSKLQAVYQKFLSLDRGAVSLLSPTEDIVKNS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2503g00011 436 Gene3D - 302 435 - -
Gabi2503g00011 436 Gene3D - 197 301 - -
Gabi2503g00011 436 ProSitePatterns Cyclins signature. 212 243 IPR006671 -
Gabi2503g00011 436 SUPERFAMILY Cyclin-like 172 307 IPR036915 -
Gabi2503g00011 436 FunFam G2/mitotic-specific cyclin 196 308 - -
Gabi2503g00011 436 Pfam Cyclin, N-terminal domain 183 307 IPR006671 -
Gabi2503g00011 436 PIRSF Cyclin_A_B_D_E 1 436 IPR046965 GO:0016538|GO:0044772
Gabi2503g00011 436 PANTHER CYCLINS 138 411 IPR039361 -
Gabi2503g00011 436 SMART Cyclin_C_2 310 429 IPR004367 -
Gabi2503g00011 436 Pfam Cyclin, C-terminal domain 310 428 IPR004367 -
Gabi2503g00011 436 SMART cyclin_7 314 398 IPR013763 -
Gabi2503g00011 436 SMART cyclin_7 217 301 IPR013763 -
Gabi2503g00011 436 SUPERFAMILY Cyclin-like 311 429 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2503g00011 Gabi-Chr2503 170155 173093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2503g00011 14 432 Core Cell Cycle Gene Families AT2G26760 43.333 4.09e-115 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2503g00011 K21777 - jre:109013760 464.922