Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2503g00003 ATGAATGTTGCCACAACAATCATGGATTCTTCTGTTGTCTTGGGTAGCACGATTTTGGAGCCTCATAATGATCTGGAATTTGAATCTCATGAAGCTGCATATGCATTTTACAAAGAATATGCCAAGTCTGCAGGGTTCGGTACTGCTAAGTTGAGCAGTCGTCGGTCTAGGGCATCAAAGGAATTTATTGATGCCAAATTTTCATGTATAAGATATGGTAATAAGCAGCAATCTGATGATGCAATTAATCCACGCCCTTCTCCAAAAATTGGTTGCAAGGCAAGCATGCATGTGAAGAGAAGACAGGATGGTAAGTGGTATGTCTACAGCTTTGTGAAGGAGCATAATCATGAGCTTTTACCTGCTCAAGCTCATTTTTTTCGGAGCCACAGGAGTTCTGATCCACTAAGTAATGATGTTAGGATGCGCAGGCGGAAGAACTCAACTGCAGTTTCTAAACTATTTAGTGCATATCAGAATGTTGATTGTTTAGAGAACTTTATGAAACATCAACATGATAAAGGGCGAAGTTTGGTTTTAGAAGCAGGGCATGCCCAATTGCTTCTTGAACTCTTCATGCGCATGCAAGAAGAGAATCCAAAATTCTTCTATGCAGTTGATTTGAATGAAGAGCATCGACTGAGAAATGTGTTCTGGGTTGATGCTAAAGGCTTGGAAGATTTTCCTTACTTTTCTGATGTTGTTTCTTTTGACACAACATATTTTACCAGCAAGTATAAAATACCATTGGTACTTTTCATTGGGGTAAACCATCATATTCAACCAATATTGCTTGGTTGTGCATTGATTGCTGATGAGACCATATATACTTTTGCCTGGTTACTGCAAACATGGTTAATAGCAATGGGAGAACGAGTTCCACAAGTGATTCTCAGTGACCAAAATGAGGCTATTAAAGCAGCTGTTGCCGCTGTTCTTCCTGGAACACGTCATTGCTTTTGTTTGTGGCATGTTTTGGAAAAGATTCCCAAACAGCTTGAATTTTTAAGCACATGGCATGATAGCTTTATGGAAAAATTTAACAAATGTATATATAAATCATGGACAGAGGAGCAATTTGAAAAGAGATGGTCGAAGTTAGTTGACAGGTTTAACCTTAGAGATGTTGAGTGGGTCCAATCCTTGTATGATGACCGTACGTGTTGGGTGCCAATTTTTATGAGAGATATTTCTTTTGCTGGCCTGTCTACTAGTTCACGCTCAGAAAGTTTAAATTCTTTGTTTGACAACTATGTCCAAGTTGATACTTCATTGAGAGAATTTATAGAACGGTACAGAGTGATTCTTGAAGATAGGCATGAAGAGGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCTGAATTGAAGTCTCCTTCCCCTTTTGAAAAACAAATGTTATTAGTTTACACACATGAGATTTATAAAAAGTTCCAGATTGAGGTTTTGGGTGCAGCTGCTTGCCATCTGAAGAAAGAAAATGATGGCATGACTACCACTTATAGTGTGAAGGACTTTGAAAATAATCAAAACTACATGGTAGAATGGAACACATCAAACTCAGATATATATTGTTCATGTCACTTGTTTGAATATAAAGGTTATCTCTGTAGACATGCTATTGTTGTTTTACAAATGTCAGGTGTTTTCAGCATCCCACCAAAGTATATATTGCAAAGATGGACAAATGCTGCTATGAGCAGGCATCCTATTGGTGAAAAATTGGAAGAGGTTCAATCCAAGATTCGGCGATTCAATGATTTATGTAGACGAGCCATAATATTGGGTGAAGAAGGTTCTTTGTCACAAGAAAGTTACTATATTGCTTTAGGTGCCATAAGTGAAGCTCTACAGCAATGTGCAAATTTGAACAACTCTGTTGAGAATGGTACAAGGCCTGATGCCTTAGCTACCCATGTTGTTTGCAATGTTGAACAAGAGTATCAATCTATTATTACATCTAACAGTAAGGTCCCTGATCCAAAAATGAATACTGGTAATAAGGCTGGGAGGACTGTTGCGGCTGGTAGGAGTCTAGGAAGTGCAGAAAATAGTGAAGGAAATAAAGGAAAGGTACCTCAGCTTGAAGCAGTGACTGGGAAAGATGGTTTTCAACAAATGGAGCCAACTGATCTGAGGTCACATAATGTCATGCCTATGCAGTTTCACAGTATGGTGCCGGTGCAGGCGCTGTTCCATAATGTTTCGTCGACACCGTATCATACCGCTGCTTCGACTCATTTGCATGAGAATCGTCTTTCTCGTTAG 2271 0.3906 MNVATTIMDSSVVLGSTILEPHNDLEFESHEAAYAFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYVYSFVKEHNHELLPAQAHFFRSHRSSDPLSNDVRMRRRKNSTAVSKLFSAYQNVDCLENFMKHQHDKGRSLVLEAGHAQLLLELFMRMQEENPKFFYAVDLNEEHRLRNVFWVDAKGLEDFPYFSDVVSFDTTYFTSKYKIPLVLFIGVNHHIQPILLGCALIADETIYTFAWLLQTWLIAMGERVPQVILSDQNEAIKAAVAAVLPGTRHCFCLWHVLEKIPKQLEFLSTWHDSFMEKFNKCIYKSWTEEQFEKRWSKLVDRFNLRDVEWVQSLYDDRTCWVPIFMRDISFAGLSTSSRSESLNSLFDNYVQVDTSLREFIERYRVILEDRHEEEAKANFDAWHETPELKSPSPFEKQMLLVYTHEIYKKFQIEVLGAAACHLKKENDGMTTTYSVKDFENNQNYMVEWNTSNSDIYCSCHLFEYKGYLCRHAIVVLQMSGVFSIPPKYILQRWTNAAMSRHPIGEKLEEVQSKIRRFNDLCRRAIILGEEGSLSQESYYIALGAISEALQQCANLNNSVENGTRPDALATHVVCNVEQEYQSIITSNSKVPDPKMNTGNKAGRTVAAGRSLGSAENSEGNKGKVPQLEAVTGKDGFQQMEPTDLRSHNVMPMQFHSMVPVQALFHNVSSTPYHTAASTHLHENRLSR 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2503g00003 756 Pfam MULE transposase domain 234 327 IPR018289 -
Gabi2503g00003 756 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 622 IPR031052 GO:0006355
Gabi2503g00003 756 MobiDBLite consensus disorder prediction 656 691 - -
Gabi2503g00003 756 Pfam SWIM zinc finger 519 547 IPR007527 GO:0008270
Gabi2503g00003 756 SMART 26again6 524 551 IPR006564 GO:0008270
Gabi2503g00003 756 ProSiteProfiles Zinc finger SWIM-type profile. 513 549 IPR007527 GO:0008270
Gabi2503g00003 756 Pfam FAR1 DNA-binding domain 36 121 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2503g00003 Gabi-Chr2503 105904 110568 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2503g00003 MULE 5.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2503g00003 - - gmx:100805273 1368.21