Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2490g00010 GTAACACCTGCCGTAGCTGCGATGGTAACGGGCGACAAGTGTTACTTTTTTAGAGTATGTTTCTTTGGTATGCAAGACACTTTGTGGGACGAATTGGGAAGACATTACTACAAGCTTTGTACCATACAAGATGCTACTGATTTTATCTTTGGCAGAGGCCAGGCTTTATTTGAGAGTTGTGCCATATCTGTTATTGATGGGGCACTAGGTCCAGGTTTCCTTGGTTATATAACAGCTCAAGGGAGATCAAGTCCAAAAGATTCAAATGGTTTTGTTTTCAAAGATTGTAAGGTGTTTGGAACTGGGTCAATTTACTTGGGAAGGCCATGGAGAGATTACTCTAGAGTTCTCTTCTACAATACCTACATGTCCTCCATTGTACAACCTATTGGTTGGGATACATGGTATTCCAATGGACACGTGGATCGCGTAACGTTTGCTGAGTATGACAATTTTGGACCTGGTGCTAATACATCCAAGCGAGTGAATTGGACTAAGAAGTTGGGTTTATCAACAGTTAAGGAGTTAGCAAGTTTGAAATTCATTGACACTGAAGGATGGAATCCTGATACGGCACATACAGAGGAGGATGTTAGAGACACAGAAGCAGCTGGTGTACAAAGTAGAAAGGCTAGGATTAAAGGTTGCCCATCTTGGGCAATAGATTACATTCACTAG 678 0.4174 VTPAVAAMVTGDKCYFFRVCFFGMQDTLWDELGRHYYKLCTIQDATDFIFGRGQALFESCAISVIDGALGPGFLGYITAQGRSSPKDSNGFVFKDCKVFGTGSIYLGRPWRDYSRVLFYNTYMSSIVQPIGWDTWYSNGHVDRVTFAEYDNFGPGANTSKRVNWTKKLGLSTVKELASLKFIDTEGWNPDTAHTEEDVRDTEAAGVQSRKARIKGCPSWAIDYIH 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2490g00010 225 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 187 - -
Gabi2490g00010 225 SUPERFAMILY Pectin lyase-like 3 190 IPR011050 -
Gabi2490g00010 225 Gene3D - 1 198 IPR012334 -
Gabi2490g00010 225 Pfam Pectinesterase 3 181 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2490g00010 Gabi-Chr2490 156040 159529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2490g00010 4 187 Carbohydrate Esterase AT1G05310 42.246 4.83e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2490g00010 - - qsa:O6P43_026793 280.796