Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2490g00007 ATGAGTGAAAGTATAGTGGTGAACAGAGAGAGTTTGTATGAAGACGAGGAGTTTGATCATCATCAAAGGAAACTTGCAGCACTTCTTGTATCAAAGAATTCATACAACAATCCATTAAAAATTAATGACTTGGCAAGTGACATGGCACCTGCGGTAGCGGCGAAGGTATGCGGTGACAAAATTTACTTTTATAGAGTTGGCTTTTTTGGTTTCCAAGACACTTTGTGGGACGAATCAGGAAGACATTACTACAAGTATTGTACCGTACAAGGTGCTGTTGATTTTATCTTTGGTGCAGGCCATGCTTTGTTTGAGAGGTGTTCCATATCTGTTATTGATGCGGCACTGGGTCCAGGTAGGCCTGGTTATATCACAGCACATGGGAGAAATAATCCAAACGATGCAACTGGTTTTGTTTTCAAAGATTGCAAGGTTTTTGGAAATGGGAAAACTTACTTAGGAAGGCCTTGGAGAGATTACGCTAGAGTTCTTTTCTATAACACCTATATGTCCAACATTATAAAACCTACTGGTTGGGAACCATGGCATTCCGTTGGACAAGAGTAA 567 0.4039 MSESIVVNRESLYEDEEFDHHQRKLAALLVSKNSYNNPLKINDLASDMAPAVAAKVCGDKIYFYRVGFFGFQDTLWDESGRHYYKYCTVQGAVDFIFGAGHALFERCSISVIDAALGPGRPGYITAHGRNNPNDATGFVFKDCKVFGNGKTYLGRPWRDYARVLFYNTYMSNIIKPTGWEPWHSVGQE 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2490g00007 188 SUPERFAMILY Pectin lyase-like 47 184 IPR011050 -
Gabi2490g00007 188 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 186 - -
Gabi2490g00007 188 Gene3D - 24 188 IPR012334 -
Gabi2490g00007 188 ProSitePatterns Pectinesterase signature 2. 89 98 IPR033131 -
Gabi2490g00007 188 Pfam Pectinesterase 45 184 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2490g00007 Gabi-Chr2490 113508 123651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2490g00007 28 188 Carbohydrate Esterase AT2G19150 45.062 3.75e-48 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2490g00007 - - qsa:O6P43_026793 230.72