Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2486g00039 ATGGAGCTTTCTGCATTCCCGAGCTTCAAAGCAGTTTCTAATGCTTCTTTTTTCCCATTTTCTTCGAATCAAGTTTGGTGCCGATGCTCTCTTCGTCTTCCTCGCCGCGATCATGGCTTTCGTTGGATTCGCAAATCAAAACCGTTTGTTCGGATCAGGATGTGCTCGGAGAAAGGTTCGTCGGGGAACGGTTATGGCGGAATCGAGAGCGGAGAAACGAAATCTGATTTCGTCGAAGTGATTGGCATTGGCAGTAGGAAGGACGCGGTTCTAGATTTCTGCTTGAACTCGCCATTTCAGTTATCGTCGCTGCGGTTTTGGAATATCCTTATGAAAGAATCACAAGAGGTGCAATTACAACAAAGGTCAATTGAAGAAGAACCTCATCCAAGAATTGTCAAAGCTCCAGTATTTATGAAGTCATGCTCAAAGACTATTGTCCTTGTGGCTAGCGCTGGATACGGATTGGACCACACTGTTGCAGTTGATATTTTTGACACTGTAAGGTCCTTAAATGGATTAACAGTTGCTATAGTTTTGAAGCCTTTTAGCTTTGAAGGTTTAAGACGACAAGATGAGGTGAAAGCTTTGGCGGGAAAACTTAAGGAGAACACAAATTTACTTATTGAAATTGATATTGATGCACTGCTCAAAAAAGACTTGTTGACTCTAGATGAGGCTGTGAAGACTGCAAATGATGCAGTTTTGCTAGCTATTAAGGCCATATCTGTTCTAAACTCTGAGACGCACAGAAAATTTATAGATAGAATGCATGATGGCATGAACGAAGCCAGCACTTTAGAAATTAATAAAATATTGGAATGCTATAAAGAAGCAGGAATTGGATTTGGAGCTGCATATAACATCAAAACTTCAATTTTGCAGTCTATATTTGATTGTCCTTTCCTGGGAGTTCGTTTGAAGGATCCAAATAGCGTAGTTATATGCATTCTCGCTGGTTCAATACCGATCAATAATAGCAATATAGAAGCCTTTCTGCATACTTTCCGTCAAACAACAGAATACGCAAGGGATATTATAATATCAACAGTACATGAGCCTGATGTTGAGCCCAACCTACTGATAACAACAGTCCTTGCACTTGGCAGTTCAAATGTAAAACAGTCTTCCCAGAATGGCGGTATACTGTCCAGACTGGCCCTGCATTTTCCTCTTGTTTTTAGCTTTTGGGGAAGACATGTTCAGCAACAAGGTGGCCCTGGGAAAGAGAATGCAGAATCTCCTCGTGAAGTGATGGGTTCTTATGACATTGATGTGGGGGCAAATAGAATTACTCCAGATGTCATAGATGACAATTTCAACAAGAACTATGTAGAGTTGGAGCCAGCAGTGAGCAACAACAGCTCAAAGTTTTCTGCTTCAAGGGATTCTGAAAAAAAAGATGATTTATTTGACACCGTAGGCAATTATTCTATCCTTTATGACTCCATTACTCGAGGAGGATTAGGCGACTCTGCTTTTCAAAGGGAGCAACTTGAAAACTGGAATCTTGGCCCCGGGTTTGAGGTGGCAAAGGAGTGGGCCCAAGAAAGGGCAGCTGATACTACACCCATGGTTGAGGATAACCTAAGCATCTTCCACCTTCCGGTTGGTGTGAGGCCTTCAGAAGAGTTGAAAGACTGTTTAGAAATCTCATTTATGACAAAACAGCATGAGCCAGAAACTGATAATAATGTGAAAGTACCAGCATTAAATGGAGGCATGCCTCCTTGGAGTGCAGTTACTGATGCAGGTTTGGAAGCAGTGATGGAATTTGCATCTTCACTTTTGAAGGGAAAGTATGCTAACAAACCAAAGAAGGATGGAGTTCTATCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAAAAAAGTGGAGTCCTGTTGTGGAAATGCAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGTGGTCTACCTGAAGGGAAGGGGCGTCTTGTTCTTGGAAATGGAAGTATATATGATGGTTTATGGCGCTATGGTAAGAGATCAGGTCCAGGAACATTCTATTTCAAAAACGGAGATATGTTTCAAGGATCATGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCTAATGGTGAGGGGCGATTCTATACAAAGTCTGGCGATGCCTTCTTTGGCAATTTCAAAGATGGATGGCGGCATGGCCAGTTTCTTTGCATTAATGCTAATGGGACAAGGTACATTGAAATTTGGGAACAGGGTGTTCTTTTAGACAGCAAGCATTTAGACAGTTGA 2325 0.4224 MELSAFPSFKAVSNASFFPFSSNQVWCRCSLRLPRRDHGFRWIRKSKPFVRIRMCSEKGSSGNGYGGIESGETKSDFVEVIGIGSRKDAVLDFCLNSPFQLSSLRFWNILMKESQEVQLQQRSIEEEPHPRIVKAPVFMKSCSKTIVLVASAGYGLDHTVAVDIFDTVRSLNGLTVAIVLKPFSFEGLRRQDEVKALAGKLKENTNLLIEIDIDALLKKDLLTLDEAVKTANDAVLLAIKAISVLNSETHRKFIDRMHDGMNEASTLEINKILECYKEAGIGFGAAYNIKTSILQSIFDCPFLGVRLKDPNSVVICILAGSIPINNSNIEAFLHTFRQTTEYARDIIISTVHEPDVEPNLLITTVLALGSSNVKQSSQNGGILSRLALHFPLVFSFWGRHVQQQGGPGKENAESPREVMGSYDIDVGANRITPDVIDDNFNKNYVELEPAVSNNSSKFSASRDSEKKDDLFDTVGNYSILYDSITRGGLGDSAFQREQLENWNLGPGFEVAKEWAQERAADTTPMVEDNLSIFHLPVGVRPSEELKDCLEISFMTKQHEPETDNNVKVPALNGGMPPWSAVTDAGLEAVMEFASSLLKGKYANKPKKDGVLSVRAASMLEAERDLSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLGNGSIYDGLWRYGKRSGPGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCINANGTRYIEIWEQGVLLDSKHLDS 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2486g00039 774 Gene3D - 717 771 - -
Gabi2486g00039 774 Gene3D - 664 716 - -
Gabi2486g00039 774 Gene3D Tubulin/FtsZ, GTPase domain 114 369 IPR036525 -
Gabi2486g00039 774 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 102 766 - -
Gabi2486g00039 774 SMART morn 732 753 IPR003409 -
Gabi2486g00039 774 SMART morn 640 661 IPR003409 -
Gabi2486g00039 774 SMART morn 686 707 IPR003409 -
Gabi2486g00039 774 SMART morn 663 684 IPR003409 -
Gabi2486g00039 774 Pfam MORN repeat 735 746 IPR003409 -
Gabi2486g00039 774 Pfam MORN repeat 688 710 IPR003409 -
Gabi2486g00039 774 Pfam MORN repeat 665 687 IPR003409 -
Gabi2486g00039 774 Pfam MORN repeat 647 663 IPR003409 -
Gabi2486g00039 774 SUPERFAMILY Tubulin nucleotide-binding domain-like 79 244 IPR036525 -
Gabi2486g00039 774 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 639 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2486g00039 Gabi-Chr2486 272170 284062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2486g00039 1 774 PP2C-type Phosphatase Gene Family AT1G75010 45.120 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2486g00039 - - gsj:114371951 1240.33