Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2486g00038 ATGGAGCTTTCTGCATTCCCGAGCTTCAAAGCAGTTTCTAATGCTTCTTTTTTCCCATTTTCTTCGAATCAAGTTTGGTGCCGATGCTCTCTTCGTCTTCCTCGCCGCGATCATGGCTTTCGTTGGATTCGCAAATCAAAACCGTTTGTTCGGATCAGGATGTGCTCGGAGAAAGGTTCGTCGGGGAACGGTTATGGCGGAATCGAGAGCGGAGAAACGAAATCTGATTTCGTCGAAGTGATTGGCATTGGCAGTAGGAAGGACGCGGTTCTAGATTTCTGCTTGAACTCGCCATTTCAGTTATCGTCGCTGCGGTTTTGGAATATCCTTATGAAAGAATCACAAGAGGTGCAATTACAACAAAGGTCAATTGAAGAAGAACCTCATCCAAGAATTGTCAAAGCTCCAGTATTTATGAAGTCATGCTCAAAGACTATTGTCCTTGTGGCTAGCGCTGGATACGGATTGGACCACACTGTTGCAGTTGATATTTTTGACACTGTAAGGTCCTTAAATGGATTAACAGTTGCTATAGTTTTGAAGCCTTTTAGCTTTGAAGGTTTAAGACGACAAGATGAGGTGAAAGCTTTGGCGGGAAAACTTAAGGAGAACACAAATTTACTTATTGAAATTGATATTGATGCACTGCTCAAAAAAGACTTGTTGACTCTAGATGAGGCTGTGAAGACTGCAAATGATGCAGTTTTGCTAGCTATTAAGGCCATATCTGTTCTAAACTCTGAGACGCACAGAAAATTTATAGATAGAATGCATGATGGCATGAACGAAGCCAGCACTTTAGAAATTAATAAAATATTGGAATGCTATAAAGAAGCAGGAATTGGATTTGGAGCTGCATATAACATCAAAACTTCAATTTTGCAGTCTATATTTGATTGTCCTTTCCTGGGAGTTCGTTTGAAGGATCCAAATAGCGTAGTTATATGCATTCTCGCTGGTTCAATACCGATCAATAATAGCAATATAGAAGCCTTTCTGCATACTTTCCGTCAAACAACAGAATACGCAAGGGATATTATAATATCAACAGTACATGAGCCTGATGTTGAGCCCAACCTACTGATAACAACAGTCCTTGCACTTGGTTCAAATGTAAAACAGTCTTCCCAGAATGGCGGTATACTGTCCAGACTGGCCCTGCATTTTCCTCTTGTTTTTAGCTTTTGGGGAAGACATGTTCAGCAACAAGGTGGCCCTGGGAAAGAGAATGCAGAATCTCCTCGTGAAGTGATGGGTTCTTATGACATTGATGTGGGGGCAAATAGAATTACTCCAGATGTCATAGATGACAATTTCAACAAGAACTATGTAGAGTTGGAGCCAGCAGTGAGCAACAACAGCTCAAAGTTTTCTGCTTCAAGGGATTCTGAAAAAAAAGATGATTTATTTGACACCGTAGGCAATTATTCTATCCTTTATGACTCCATTACTCGAGGAGGATTAGGCGACTCTGCTTTTCAAAGGGAGCAACTTGAAAACTGGAATCTTGGCCCCGGGTTTGAGGTGGCAAAGGAGTGGGCCCAAGAAAGGGCAGCTGATACTACACCCATGGTTGAGGATAACCTAAGCATCTTCCACCTTCCGGTTGGTGTGAGGCCTTCAGAAGAGTTGAAAGACTGTTTAGAAATCTCATTTATGACAAAACAGCATGAGCCAGAAACTGATAATAATGTGAAAGTACCAGCATTAAATGGAGGCATGCCTCCTTGGAGTGCAGTTACTGATGCAGGTTTGGAAGCAGTGATGGAATTTGCATCTTCACTTTTGAAGGGAAAGTATGCTAACAAACCAAAGAAGGATGGAGTTCTATCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAAAAAAGTGGAGTCCTGTTGTGGAAATGCAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGTGGTCTACCTGAAGGGAAGGGGCGTCTTGTTCTTGGAAATGGAAGTATATATGATGGTTTATGGCGCTATGGTAAGAGATCAGGTCCAGGAACATTCTATTTCAAAAACGGAGATATGTTTCAAGGATCATGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCTAATGGTGAGGGGCGATTCTATACAAAGTCTGGCGATGCCTTCTTTGGCAATTTCAAAGATGGATGGCGGCATGGCCAGTTTCTTTGCATTAATGCTAATGGGACAAGGTACATTGAAATTTGGGAACAGGGTGTTCTTTTAGACAGCAAGCATTTAGACAGTTGA 2322 0.422 MELSAFPSFKAVSNASFFPFSSNQVWCRCSLRLPRRDHGFRWIRKSKPFVRIRMCSEKGSSGNGYGGIESGETKSDFVEVIGIGSRKDAVLDFCLNSPFQLSSLRFWNILMKESQEVQLQQRSIEEEPHPRIVKAPVFMKSCSKTIVLVASAGYGLDHTVAVDIFDTVRSLNGLTVAIVLKPFSFEGLRRQDEVKALAGKLKENTNLLIEIDIDALLKKDLLTLDEAVKTANDAVLLAIKAISVLNSETHRKFIDRMHDGMNEASTLEINKILECYKEAGIGFGAAYNIKTSILQSIFDCPFLGVRLKDPNSVVICILAGSIPINNSNIEAFLHTFRQTTEYARDIIISTVHEPDVEPNLLITTVLALGSNVKQSSQNGGILSRLALHFPLVFSFWGRHVQQQGGPGKENAESPREVMGSYDIDVGANRITPDVIDDNFNKNYVELEPAVSNNSSKFSASRDSEKKDDLFDTVGNYSILYDSITRGGLGDSAFQREQLENWNLGPGFEVAKEWAQERAADTTPMVEDNLSIFHLPVGVRPSEELKDCLEISFMTKQHEPETDNNVKVPALNGGMPPWSAVTDAGLEAVMEFASSLLKGKYANKPKKDGVLSVRAASMLEAERDLSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLGNGSIYDGLWRYGKRSGPGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCINANGTRYIEIWEQGVLLDSKHLDS 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2486g00038 773 Pfam MORN repeat 664 686 IPR003409 -
Gabi2486g00038 773 Pfam MORN repeat 687 709 IPR003409 -
Gabi2486g00038 773 Pfam MORN repeat 646 662 IPR003409 -
Gabi2486g00038 773 Pfam MORN repeat 734 745 IPR003409 -
Gabi2486g00038 773 Gene3D Tubulin/FtsZ, GTPase domain 114 369 IPR036525 -
Gabi2486g00038 773 Gene3D - 663 715 - -
Gabi2486g00038 773 Gene3D - 716 770 - -
Gabi2486g00038 773 SUPERFAMILY Tubulin nucleotide-binding domain-like 79 244 IPR036525 -
Gabi2486g00038 773 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 102 765 - -
Gabi2486g00038 773 SMART morn 639 660 IPR003409 -
Gabi2486g00038 773 SMART morn 662 683 IPR003409 -
Gabi2486g00038 773 SMART morn 685 706 IPR003409 -
Gabi2486g00038 773 SMART morn 731 752 IPR003409 -
Gabi2486g00038 773 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 638 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2486g00038 Gabi-Chr2486 272170 284062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2486g00038 1 773 PP2C-type Phosphatase Gene Family AT1G75010 44.924 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2486g00038 - - gsj:114371951 1236.48