Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2486g00028 ATGAATAGCTGTGGAAGAGAAGGAGCGGTGAGGCAATATATAAGATCGAAGGTTCCTCGTTTAAGATGGACCCCTGACCTGCACCGTTGCTTTGTTCATGCCATTGAGAATCTTGGAGGTCATCACAAGGCTACCCCTAAGCTTGTTCTTCAGTTGATGGATGTCAAAGGGCTCACAATTTCACACGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGAGGTGACTTGGGAAGACAAGGAAGGACATCCTCCCAACATAGAAACCAATCTTTTGAGGAACACGATGATGGGTGTGTTGATGAAGTGAATGATGTTGGTGTTCAATACTCTTGTTCAAAACTCACTCGAAGAGAATCTGATTCCTTATTGGGCTACAGTGATTTCTCCCCTAAAAGAGCAAGAATCGAGAGGACGAGTGAGAGCCTGCAATGCAGCCAAAGAGTTCCAAATCCGTACTGCTTTTATGATTATATGGCTGAAGAGGAGCAGAAGGGAATAAAGGAGGTTTGTGGTGGTTCAAGACGGCAGACACAACCCCATTCCACACCATTCCATCTGCTACCTGATTTTTGCAACCTTAGTTCATTCAAATGTCAAAAGCAAGAATCTGATTTCCTCCAGGTTACTAAATTAAATGGTAGAACCACTTCGCAGATAATTAATGTGGTTGGGAACGCTGAGTCGGCACGTGCAGAAGTTGAACATGTAGGAGGGTGTGAGTTGTCATTGTCACTCACATTGCCGAATCCTTCCCCTCAGAGAAGTAATGCTTCTTCGGCCAGTGAGATCAGTGAGGCAATCTCATCTTGCCTTGGGTTTAACAATTACAAAGACTGCTTTAGTTCTTCCGCTGTCAAAGATAGAATTAATTTAGACCTATCTTTAGCCTTATGTGGCAATTGA 906 0.4371 MNSCGREGAVRQYIRSKVPRLRWTPDLHRCFVHAIENLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTSSQHRNQSFEEHDDGCVDEVNDVGVQYSCSKLTRRESDSLLGYSDFSPKRARIERTSESLQCSQRVPNPYCFYDYMAEEEQKGIKEVCGGSRRQTQPHSTPFHLLPDFCNLSSFKCQKQESDFLQVTKLNGRTTSQIINVVGNAESARAEVEHVGGCELSLSLTLPNPSPQRSNASSASEISEAISSCLGFNNYKDCFSSSAVKDRINLDLSLALCGN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2486g00028 301 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Gabi2486g00028 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Gabi2486g00028 301 FunFam Myb family transcription factor 17 75 - -
Gabi2486g00028 301 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 6 151 IPR046955 GO:0003700
Gabi2486g00028 301 Gene3D - 18 74 - -
Gabi2486g00028 301 MobiDBLite consensus disorder prediction 76 96 - -
Gabi2486g00028 301 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Gabi2486g00028 301 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2486g00028 Gabi-Chr2486 193959 197890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2486g00028 1 74 G2-like Transcription Factor Family AT1G14600 70.886 4.43e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi2486g00028 Myb_DNA-binding 6.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2486g00028 - - gmx:100787188 399.823