Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2485g00024 ATGGCAACGGCAACATACCCACCACCTCCACCTTATTATAGACTTTACAAAGATTACTTGCAAGATCCTAAGTCTGCTCCTGAGCCTCCACCACCGATAGAAGGGACTTACGTTTGTTTCGGAGGCAGTTACACCACTAGTGACATTCTACCCAGCTTGGAAGAACAAGGGGTGCGCCAGCTCTATTCTAAGGGGCCTAATCTTGATTTCAAGAAGGAGCTGAGGTCACTTAATGGAGACTTGCAACTACACATTTTGGAGCTTGCCGATATTCTTATTGAGAGACCATCACAGTATGCAAGGAGAGTTGAAGAAATGTCAACTGTATTCAAAAACTTACATCACCTTTTAAATTCACTGCGTCCTCATCAGGCAAGAGCAACATTAATTCACATTTTGGAAATTCAGATACAGCGCCGTAAACAGGCAGTGGAGGACATAAAGAGGAGGAGAGATGAAGCAAGAAGACTCCTTAACGAGTCCCTGGCGACACTGGATGGCCATTAG 507 0.4477 MATATYPPPPPYYRLYKDYLQDPKSAPEPPPPIEGTYVCFGGSYTTSDILPSLEEQGVRQLYSKGPNLDFKKELRSLNGDLQLHILELADILIERPSQYARRVEEMSTVFKNLHHLLNSLRPHQARATLIHILEIQIQRRKQAVEDIKRRRDEARRLLNESLATLDGH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2485g00024 168 Coils Coil 130 164 - -
Gabi2485g00024 168 Gene3D - 61 159 IPR044888 -
Gabi2485g00024 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Gabi2485g00024 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Gabi2485g00024 168 SUPERFAMILY Mediator hinge subcomplex-like 67 159 IPR037212 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2485g00024 Gabi-Chr2485 320917 325255 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Gabi2485g00024 Med7 5.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2485g00024 K15148 - gmx:100792250 303.908