Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi2484g00008 | ATGGTTCAGTTAAGCAAGATGGCAATTGTTCTAGTAATTGCTGTTGCTGCAGCAGCAATATTTCAAAGCACAGAAGCTGCAGATCACACAGTAGGGGGATCCACTGGTTGGATAAGCTCTCCTTCTGGTGGCGCTTCCTTCTACTCCAACTGGGCTTCCAGTATCACCTTCAAAGAAAATGATGTCCTAGTGTTCAATTTCGCTACCGGAAGCCACACTGTGGCAGAGATTACTAAGACAAACTTTGACAGTTGCAACATGAATCAAAACATCCAAGTCTTGGTAACATCACCGGCTAGATTCACCCTCAATCGTACAGGTGAATTCTACTTCGCATGCAGCATCTCAGGACATTGCAACAGTGGCCAAAAGCTAAGTGTTAAAGTCACAGGCTCTTCACCTGCACCAGGAAAAGCTCCGTCTCCCGCTCATTCTCCTTCTTCTCCTCGTCCTCCTGTGTCTGGAACCACCCCTCCTCCATCTTCCAACGAAGGAGCACCACCTCCAGCATCCCCATCTGAGCCAAGTGCAACACCTCCTCCATCACCTAGCTCCGCCACCTCTCTTGCTGCTGCTACTTTCTCGCTTCTTCTCACCATCATTGTCACAAACTTATTGTTTTAG | 624 | 0.4808 | MVQLSKMAIVLVIAVAAAAIFQSTEAADHTVGGSTGWISSPSGGASFYSNWASSITFKENDVLVFNFATGSHTVAEITKTNFDSCNMNQNIQVLVTSPARFTLNRTGEFYFACSISGHCNSGQKLSVKVTGSSPAPGKAPSPAHSPSSPRPPVSGTTPPPSSNEGAPPPASPSEPSATPPPSPSSATSLAAATFSLLLTIIVTNLLF | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi2484g00008 | 207 | MobiDBLite | consensus disorder prediction | 139 | 182 | - | - | |
| Gabi2484g00008 | 207 | Gene3D | - | 26 | 140 | IPR008972 | - | |
| Gabi2484g00008 | 207 | MobiDBLite | consensus disorder prediction | 127 | 187 | - | - | |
| Gabi2484g00008 | 207 | FunFam | Blue copper | 25 | 135 | - | - | |
| Gabi2484g00008 | 207 | SUPERFAMILY | Cupredoxins | 26 | 129 | IPR008972 | - | |
| Gabi2484g00008 | 207 | PANTHER | BLUE COPPER PROTEIN | 22 | 157 | IPR039391 | GO:0009055 | |
| Gabi2484g00008 | 207 | Pfam | Plastocyanin-like domain | 46 | 123 | IPR003245 | GO:0009055 | |
| Gabi2484g00008 | 207 | ProSiteProfiles | Phytocyanin domain profile. | 27 | 131 | IPR003245 | GO:0009055 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi2484g00008 | Gabi-Chr2484 | 190833 | 192526 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi2484g00008 | 4 | 187 | Phytocyanin Superfamily | AT5G53870 | 35.176 | 5.51e-26 | 101 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gabi2484g00008 | - | - | cam:101507955 | 181.415 |