Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2484g00007 ATGGTTCAGTTAAACAAGATGACAATTGTTCTAGTAATTGCTGCTGCTGCAGCAATATTTCAAAGCACAGAAGCTGCAGATCACACAGTAGGGGGATCCACTGGTTGGATAAGTTCTCCATCTGGTGGTGCTTCCTTCTATTCCAACTGGGCTTCCAGTATCACCTTCAAAGAAAATGATGTCCTAGTGTTCAATTTCGCTACCGGAAGCCACACTGTGGCAGAGATTACTAAGACAAACTTTGACAGTTGCAACATGAATCAAAACATCCAAGTCTTGGTAACATCACCGGCTAGATTCACCCTCAATCGTACAGGTGAATTCTACTTCGCATGCAGCATCTCAGGACATTGCAACAGTGGCCAAAAGCTAAGTGTTAAAGTCACAGGCTCTTCACCTGCACCAGGAAAAGCTCCGTCTCCCGCTCATTCTCCTTCTTCTCCTCGTCCTCCTGTGTCTGGAACCACCCCTCCTCCATCTTCCAACGAAGGAGCACCACCTCCAGCATCCCCAACTGAGCCAAGTGCAACACCTCCTCCATCACCTAGCTCCGCCACCTCTCTTGCTGCTGCTACTTTCTCACTTCTTCTCACCATCATTGTTTCAAACTTACTGTTTTAG 621 0.4718 MVQLNKMTIVLVIAAAAAIFQSTEAADHTVGGSTGWISSPSGGASFYSNWASSITFKENDVLVFNFATGSHTVAEITKTNFDSCNMNQNIQVLVTSPARFTLNRTGEFYFACSISGHCNSGQKLSVKVTGSSPAPGKAPSPAHSPSSPRPPVSGTTPPPSSNEGAPPPASPTEPSATPPPSPSSATSLAAATFSLLLTIIVSNLLF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2484g00007 206 PANTHER BLUE COPPER PROTEIN 26 156 IPR039391 GO:0009055
Gabi2484g00007 206 Pfam Plastocyanin-like domain 45 122 IPR003245 GO:0009055
Gabi2484g00007 206 Gene3D - 25 139 IPR008972 -
Gabi2484g00007 206 FunFam Blue copper 24 134 - -
Gabi2484g00007 206 MobiDBLite consensus disorder prediction 138 181 - -
Gabi2484g00007 206 SUPERFAMILY Cupredoxins 25 128 IPR008972 -
Gabi2484g00007 206 ProSiteProfiles Phytocyanin domain profile. 26 130 IPR003245 GO:0009055
Gabi2484g00007 206 MobiDBLite consensus disorder prediction 126 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2484g00007 Gabi-Chr2484 178222 179676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2484g00007 11 186 Phytocyanin Superfamily AT5G53870 36.649 1.88e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2484g00007 - - cam:101507955 186.422