Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2484g00006 ATGGTTCAGTTAAGCAAGATGGCAATTGTTCTAGTAATTGTTGTTGCTGCAGCAGCAATATTTCAAAGCACAGAAGCTGCAGATCACACAGTAGGGGGATCCACTGGTTGGATAAGCTCTCCTTCTGGTGGCGCTTCCTTCTACTCCAACTGGGCTTCCAGTATCACCTTCAAAGAAAATGATGTCCTAGTGTTCAATTTCGCTACCGGAAGCCACACTGTGGCAGAGATTACTAAGACAAACTTTGACAGTTGCAACATGAATCAAAACATCCAAGTCTTGGTAACATCACCGGCTAGATTCACTCTCAATCGTACAGGTGAATTCTACTTCGCATGCAGCATCTCAGGACATTGCAACAGTGGCCAAAAGCTAAGTGTTAAAGTCACAGGCTCTTCACCTGCACCAGGAAAAGCTCCATCTCCCGCTCATTCTCCTTCTTCTCCTCGTCCTCCTGTGTCTGGAACCACCCCTCCTCCATCTTCCAACGAAGGAGCACCACCTCCAGCATCCCCATCTGAGCCAGGTGCAACACCTCCTCCATCACCTAGCTCCGCCACCTCTCTTGCTGCTGCTACTTTCTCGCTTCTTCTCACCATCACTGTCTCAAACTTACTGTTTTAG 624 0.4808 MVQLSKMAIVLVIVVAAAAIFQSTEAADHTVGGSTGWISSPSGGASFYSNWASSITFKENDVLVFNFATGSHTVAEITKTNFDSCNMNQNIQVLVTSPARFTLNRTGEFYFACSISGHCNSGQKLSVKVTGSSPAPGKAPSPAHSPSSPRPPVSGTTPPPSSNEGAPPPASPSEPGATPPPSPSSATSLAAATFSLLLTITVSNLLF 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2484g00006 207 MobiDBLite consensus disorder prediction 139 182 - -
Gabi2484g00006 207 Gene3D - 26 140 IPR008972 -
Gabi2484g00006 207 MobiDBLite consensus disorder prediction 127 187 - -
Gabi2484g00006 207 FunFam Blue copper 25 135 - -
Gabi2484g00006 207 PANTHER BLUE COPPER PROTEIN 21 154 IPR039391 GO:0009055
Gabi2484g00006 207 SUPERFAMILY Cupredoxins 26 129 IPR008972 -
Gabi2484g00006 207 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
Gabi2484g00006 207 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2484g00006 Gabi-Chr2484 143105 144341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2484g00006 4 187 Phytocyanin Superfamily AT5G53870 34.673 5.92e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2484g00006 - - cam:101507955 183.726