Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2483g00003 ATGGCCGTTGCTGTTGTATTCACAATTTATACAATGGCGCTGGTGAATGATGATAACGATAATGATATAGGAGACGGGTTTCCGATAGGAATGCGTGTTCTTCTTGTAGATAACGACCGAGAAAGCATTTTCAGTTTAGGGACTATGCTCCGAAGTTGTCAATACCAAGTAACCACAGCTACAGATGCAACGACAGTACTGAAGATGTTGAGAGTGAAGATGTTGAGAGAAAACAAGTTTGACCTTGTAATCAGTGAACTACACATGCCTGAAATTGATGGACTTAAGCTGCTTAAGCTCATGCAACCTTGGATGGACATACCTGTTATATTGTTCTCCAATGATTATGACAAAAATTTGGTGATGAAAGCAGTTACTCTGGGAGCATGTGATTATTTGTTGAAACCAATTAGAATTGAAGAGCTGCGAATATTTGGCAGCATGTATATAGAAAGAAGATTAATTCTAAGAAGAATGAAGATCAAAATAGGAACTCATCAACCGCTTGCTTGCCTCAATTAG 522 0.3851 MAVAVVFTIYTMALVNDDNDNDIGDGFPIGMRVLLVDNDRESIFSLGTMLRSCQYQVTTATDATTVLKMLRVKMLRENKFDLVISELHMPEIDGLKLLKLMQPWMDIPVILFSNDYDKNLVMKAVTLGACDYLLKPIRIEELRIFGSMYIERRLILRRMKIKIGTHQPLACLN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2483g00003 173 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 145 IPR045279 GO:0009736
Gabi2483g00003 173 SUPERFAMILY CheY-like 30 160 IPR011006 -
Gabi2483g00003 173 SMART REC_2 31 144 IPR001789 GO:0000160
Gabi2483g00003 173 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
Gabi2483g00003 173 Gene3D - 31 169 - -
Gabi2483g00003 173 Pfam Response regulator receiver domain 33 143 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2483g00003 Gabi-Chr2483 35176 47393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2483g00003 22 143 Response Regulator Gene Family AT4G31920 54.098 3.39e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2483g00003 Response_reg 1.6e-20 CL0304