Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2483g00001 ATGGCCGTTGCTGTTGTATTCACAATTTATGAGACAATGGCGCTGGTGAATGATGATAACGATAATGATATAGGAGACGGGTTTCCGATAGGAATGCGTGTTCTTCTTGTAGATAACGACCGAGAAAGCATTTTCAGTTTAGGGACTATGCTCCGAAGTTGTCAATACCAAGTAACCACAGCTACAGATGCAACGACAGTACTGAAGATGTTGAGAGTGAAGATGTTGAGAGAAAACAAGTTTGACCTTGTAATCAGTGAACTACACATGCCTGAAATTGATGGACTTAAGCTGCTTAAGCTCATGCAACCTTGGATGGACATACCTGTTATATTGTTCTCCAATGATTATGACAAAAATTTGGTGATGAAAGCAGTTACTCTGGGAGCATGTGATTATTTGTTGAAACCAATTAGAATTGAAGAGCTGCGAATATTTGGCAGCATGTATATAGAAAGAAGATTAATTCTAAGAAGAATGAAGATCAAAATAGGAACTCATCAACCGCTTGCTTGCCTCAATTAG 525 0.3867 MAVAVVFTIYETMALVNDDNDNDIGDGFPIGMRVLLVDNDRESIFSLGTMLRSCQYQVTTATDATTVLKMLRVKMLRENKFDLVISELHMPEIDGLKLLKLMQPWMDIPVILFSNDYDKNLVMKAVTLGACDYLLKPIRIEELRIFGSMYIERRLILRRMKIKIGTHQPLACLN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2483g00001 174 SMART REC_2 32 145 IPR001789 GO:0000160
Gabi2483g00001 174 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 146 IPR045279 GO:0009736
Gabi2483g00001 174 Pfam Response regulator receiver domain 34 144 IPR001789 GO:0000160
Gabi2483g00001 174 SUPERFAMILY CheY-like 31 161 IPR011006 -
Gabi2483g00001 174 Gene3D - 32 170 - -
Gabi2483g00001 174 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2483g00001 Gabi-Chr2483 35170 47393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2483g00001 23 144 Response Regulator Gene Family AT4G31920 54.098 3.51e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2483g00001 Response_reg 1.6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2483g00001 - K14491 nnu:104603346 141.739